Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 5
- peroxisome 1
- extracellular 1
- plasma membrane 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96508 | Sorghum | plastid | 87.85 | 89.81 |
| Zm00001d020002_P002 | Maize | plastid | 86.92 | 88.57 |
| TraesCS5A01G177700.1 | Wheat | plastid | 85.36 | 88.39 |
| TraesCS5D01G182000.1 | Wheat | plastid | 85.05 | 88.06 |
| TraesCS5B01G175000.1 | Wheat | plastid | 84.74 | 88.03 |
| HORVU5Hr1G054000.1 | Barley | mitochondrion, plastid | 84.74 | 87.74 |
| GSMUA_Achr9P27480_001 | Banana | mitochondrion | 71.34 | 71.12 |
| Bra008265.1-P | Field mustard | plastid | 69.16 | 68.52 |
| PGSC0003DMT400025715 | Potato | plastid | 67.6 | 68.24 |
| CDY45980 | Canola | plastid | 68.85 | 68.21 |
| VIT_18s0122g00430.t01 | Wine grape | plastid | 69.78 | 67.67 |
| CDY20401 | Canola | plastid | 68.54 | 67.28 |
| AT1G76570.1 | Thale cress | plastid | 66.98 | 65.75 |
| KRH06016 | Soybean | plastid | 67.6 | 65.36 |
| Solyc04g082920.2.1 | Tomato | plastid | 41.12 | 60.55 |
| KRH17548 | Soybean | cytosol, peroxisome, plastid | 33.02 | 52.48 |
| Os01t0720500-01 | Rice | plastid | 37.07 | 44.91 |
| Os01t0600900-02 | Rice | plastid | 36.14 | 44.44 |
| Os09t0346500-04 | Rice | plastid | 36.14 | 43.77 |
| Os03t0592500-01 | Rice | extracellular | 33.33 | 40.68 |
| Os07t0562700-01 | Rice | extracellular, plastid | 32.4 | 39.1 |
| Os06t0320500-01 | Rice | plastid | 29.28 | 39.0 |
| Os11t0242800-01 | Rice | plastid | 32.09 | 36.4 |
| Os02t0764500-01 | Rice | plastid | 26.79 | 32.95 |
| Os07t0577600-01 | Rice | plastid | 26.48 | 32.32 |
| Os07t0558400-01 | Rice | plasma membrane, plastid | 28.97 | 32.07 |
| Os09t0439500-01 | Rice | plastid | 26.17 | 31.82 |
| Os02t0197600-01 | Rice | plastid | 25.86 | 30.86 |
| Os08t0435900-01 | Rice | mitochondrion | 23.05 | 30.33 |
| Os04t0457000-01 | Rice | extracellular, plasma membrane, plastid | 23.05 | 29.37 |
Protein Annotations
| MapMan:1.1.1.1.5 | Gene3D:1.10.3460.10 | EntrezGene:4346649 | ProteinID:BAD33211.1 | ProteinID:BAF24715.1 | ProteinID:BAT07315.1 |
| InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009765 | GO:GO:0009768 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010218 | GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0031409 | InterPro:IPR023329 |
| EnsemblPlantsGene:Os09g0296800 | EnsemblPlants:Os09t0296800-01 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF24 | UniProt:Q69TB3 |
| SUPFAM:SSF103511 | UniParc:UPI00003FF329 | RefSeq:XP_015651144.1 | SEG:seg | : | : |
Description
PSII type l Cab EChlorophyll A-B binding protein family protein. (Os09t0296800-01)
Coordinates
chr9:+:7185218..7188139
Molecular Weight (calculated)
34927.5 Da
IEP (calculated)
9.205
GRAVY (calculated)
0.129
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPLLLRLR SPAPPAAVAA GSLSRRRRRR RAGLAPVRAS WQELAGVLVF SAVPFTAVKA LANSPLGARL RRRLDDRKAA AAAEADALRS AARQARTASS
101: WYGDERPRWL GPVPYEYPAH LTGEYPGDYG FDIAGLGRDP VAFANYFNFE ILHCRWAMLA ALGVVVPELL DLFGVVHFVE PVWWKVGYAK LQGDTLDYLG
201: IPGFRIAGGQ GVIVIAICQA LLMVGPEYAR YCGIEALEPL GLYLPGDINY PGGALFDPLG LSKDPVAFED LKVKEIKNGR LAMVAWLGFY IQAAVTGKGP
301: IQNLVEHLSD PLHNNILSSF V
101: WYGDERPRWL GPVPYEYPAH LTGEYPGDYG FDIAGLGRDP VAFANYFNFE ILHCRWAMLA ALGVVVPELL DLFGVVHFVE PVWWKVGYAK LQGDTLDYLG
201: IPGFRIAGGQ GVIVIAICQA LLMVGPEYAR YCGIEALEPL GLYLPGDINY PGGALFDPLG LSKDPVAFED LKVKEIKNGR LAMVAWLGFY IQAAVTGKGP
301: IQNLVEHLSD PLHNNILSSF V
001: MALFQEKLSS LSSSYSSIHS LPRILVSKPR NRIAVTKSRS ICRASWQELA GVLVFSAIPF TAVKAIANSS IGVSLRRRLE EKKKEAVENS SRFKSKAQEA
101: RNDSKWYGKE RPRWFGPIPY DYPPYLTGEL PGDYGFDIAG LGKDRLTFDK YFNFEILHAR WAMLAALGAL IPEVFDLTGT FHFAEPVWWR VGYSKLQGET
201: LEYLGIPGLH VAGSQGVIVI AICQVLLMVG PEYARYCGIE ALEPLGIYLP GDINYPGGTL FDPLNLSEDP VAFEDLKVKE IKNGRLAMVA WLGFYAQAAF
301: TGKGPVQNLV DHVSDPLHNN LIAMLQT
101: RNDSKWYGKE RPRWFGPIPY DYPPYLTGEL PGDYGFDIAG LGKDRLTFDK YFNFEILHAR WAMLAALGAL IPEVFDLTGT FHFAEPVWWR VGYSKLQGET
201: LEYLGIPGLH VAGSQGVIVI AICQVLLMVG PEYARYCGIE ALEPLGIYLP GDINYPGGTL FDPLNLSEDP VAFEDLKVKE IKNGRLAMVA WLGFYAQAAF
301: TGKGPVQNLV DHVSDPLHNN LIAMLQT
Arabidopsis Description
LHCB7Chlorophyll a-b binding protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.