Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 3
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G299200.1 | Wheat | plastid | 82.76 | 85.04 |
| TraesCS6A01G319700.1 | Wheat | plastid | 82.38 | 84.65 |
| TraesCS6B01G350500.1 | Wheat | plastid | 82.76 | 84.05 |
| EES07574 | Sorghum | plastid | 82.76 | 81.2 |
| Zm00001d018157_P001 | Maize | plastid | 83.14 | 80.67 |
| TraesCS6B01G312900.1 | Wheat | plastid | 43.3 | 77.93 |
| GSMUA_Achr7P13020_001 | Banana | plastid | 68.97 | 66.18 |
| Bra014048.1-P | Field mustard | mitochondrion, plastid | 63.6 | 64.34 |
| CDY17055 | Canola | mitochondrion, plastid | 63.6 | 64.34 |
| CDY43213 | Canola | mitochondrion, plastid | 63.6 | 64.34 |
| VIT_18s0001g10550.t01 | Wine grape | plastid | 64.75 | 64.02 |
| AT1G45474.2 | Thale cress | mitochondrion | 62.45 | 63.67 |
| Solyc07g022900.2.1 | Tomato | plastid | 63.6 | 63.36 |
| KRH51989 | Soybean | nucleus | 65.52 | 60.0 |
| PGSC0003DMT400011381 | Potato | plastid | 54.41 | 53.38 |
| KRH61286 | Soybean | mitochondrion | 39.85 | 47.49 |
| Os08t0435900-01 | Rice | mitochondrion | 40.23 | 43.03 |
| Os07t0577600-01 | Rice | plastid | 42.91 | 42.59 |
| Os04t0457000-01 | Rice | extracellular, plasma membrane, plastid | 38.7 | 40.08 |
| Os02t0197600-01 | Rice | plastid | 41.0 | 39.78 |
| Os09t0439500-01 | Rice | plastid | 39.46 | 39.02 |
| Os06t0320500-01 | Rice | plastid | 31.8 | 34.44 |
| Os01t0600900-02 | Rice | plastid | 33.33 | 33.33 |
| Os09t0346500-04 | Rice | plastid | 33.33 | 32.83 |
| Os01t0720500-01 | Rice | plastid | 32.95 | 32.45 |
| Os07t0562700-01 | Rice | extracellular, plastid | 30.65 | 30.08 |
| Os03t0592500-01 | Rice | extracellular | 30.27 | 30.04 |
| Os11t0242800-01 | Rice | plastid | 32.57 | 30.04 |
| Os07t0558400-01 | Rice | plasma membrane, plastid | 32.95 | 29.66 |
| Os09t0296800-01 | Rice | plastid | 32.95 | 26.79 |
Protein Annotations
| MapMan:1.1.4.1.5 | Gene3D:1.10.3460.10 | EntrezGene:4330828 | EMBL:AK066291 | ProteinID:BAD17114.1 | ProteinID:BAF10130.1 |
| ProteinID:BAS81056.1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | ProteinID:EEE57857.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006091 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009409 |
| GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009644 | GO:GO:0009645 | GO:GO:0009765 | GO:GO:0009768 |
| GO:GO:0009782 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0031409 | GO:GO:0042803 |
| InterPro:IPR023329 | EnsemblPlantsGene:Os02g0764500 | EnsemblPlants:Os02t0764500-01 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF23 |
| UniProt:Q6Z7Q1 | SUPFAM:SSF103511 | UniParc:UPI000035ADF5 | RefSeq:XP_015623305.1 | SEG:seg | : |
Description
Similar to Lhca5 protein. (Os02t0764500-01);Similar to chlorophyll a-b binding protein 4. (Os02t0764500-02)
Coordinates
chr2:-:32199542..32201608
Molecular Weight (calculated)
27896.7 Da
IEP (calculated)
6.602
GRAVY (calculated)
0.105
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLGANSHG RVLHTCTLSP KPVTALSRSM AAIPGHHVFQ SPRARIAVRA STERATWLPG LDPPPHLDGT LPGDFGFDPL GLGEEPANLK WYVQAELVHC
101: RFAMAGVAGI LATDLIRVSG INNLPVWFEA GATKFDFANT TALFFVQLLL MGFAETKRYM DFINPGSQAE EGTFLGIEAA LAGSQPGYPG GPLFNPLGLA
201: KDIENADEAK LKEIKNGRLA MVAMLGFIVQ ASVTHVGPID NLLTHLSDPF NKNIIHTLSS S
101: RFAMAGVAGI LATDLIRVSG INNLPVWFEA GATKFDFANT TALFFVQLLL MGFAETKRYM DFINPGSQAE EGTFLGIEAA LAGSQPGYPG GPLFNPLGLA
201: KDIENADEAK LKEIKNGRLA MVAMLGFIVQ ASVTHVGPID NLLTHLSDPF NKNIIHTLSS S
001: MAVVLRGGIT GGFLHHRRDA SSVITRRISS VKAAGGGINP TVAVERATWL PGLNPPPYLD GNLAGDYGFD PLGLGEDPES LKWYVQAELV HSRFAMLGVA
101: GILFTDLLRT TGIRNLPVWY EAGAVKFDFA STKTLIVVQF LLMGFAETKR YMDFVSPGSQ AKEGSFFFGL EAALEGLEPG YPGGPLLNPL GLAKDVQNAH
201: DWKLKEIKNG RLAMMAMLGF FVQASVTHTG PIDNLVEHLS NPWHKTIIQT LFTSTS
101: GILFTDLLRT TGIRNLPVWY EAGAVKFDFA STKTLIVVQF LLMGFAETKR YMDFVSPGSQ AKEGSFFFGL EAALEGLEPG YPGGPLLNPL GLAKDVQNAH
201: DWKLKEIKNG RLAMMAMLGF FVQASVTHTG PIDNLVEHLS NPWHKTIIQT LFTSTS
Arabidopsis Description
LHCA5Photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C639]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.