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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G319700.1 Wheat plastid 98.03 98.03
TraesCS6B01G350500.1 Wheat plastid 97.64 96.5
Os02t0764500-01 Rice plastid 85.04 82.76
EES07574 Sorghum plastid 79.13 75.56
Zm00001d018157_P001 Maize plastid 78.74 74.35
GSMUA_Achr7P13020_001 Banana plastid 70.08 65.44
AT1G45474.2 Thale cress mitochondrion 64.57 64.06
CDY17055 Canola mitochondrion, plastid 64.57 63.57
VIT_18s0001g10550.t01 Wine grape plastid 65.75 63.26
Bra014048.1-P Field mustard mitochondrion, plastid 64.17 63.18
CDY43213 Canola mitochondrion, plastid 64.17 63.18
Solyc07g022900.2.1 Tomato plastid 64.57 62.6
KRH51989 Soybean nucleus 64.96 57.89
PGSC0003DMT400011381 Potato plastid 55.91 53.38
KRH61286 Soybean mitochondrion 40.94 47.49
TraesCS5D01G238300.1 Wheat mitochondrion, plastid 41.73 43.27
TraesCS2D01G200700.1 Wheat plastid 42.13 41.96
TraesCS6D01G152700.1 Wheat golgi 41.34 39.03
TraesCS2D01G320900.1 Wheat plastid 37.4 37.25
TraesCS5D01G219100.1 Wheat plastid 38.58 35.64
TraesCS1D01G411300.1 Wheat plastid 36.22 34.59
TraesCS6D01G088700.1 Wheat plastid 31.1 34.35
TraesCS7D01G227300.1 Wheat plastid 33.07 34.29
TraesCS6D01G088800.1 Wheat plastid 35.83 34.21
TraesCS1D01G374900.1 Wheat plastid 35.43 33.96
TraesCS1D01G306200.1 Wheat plastid 35.04 33.84
TraesCS5D01G464700.1 Wheat plastid 35.43 33.83
TraesCS6D01G088600.1 Wheat plastid 35.43 33.83
TraesCS1D01G411600.1 Wheat plastid 35.43 33.83
TraesCS7D01G276300.1 Wheat plastid 34.65 33.72
TraesCS5D01G357600.1 Wheat plastid 35.04 33.58
TraesCS5D01G464900.1 Wheat plastid 35.04 33.46
TraesCS7D01G199400.1 Wheat plastid 35.04 33.46
TraesCS1D01G375100.1 Wheat plastid 34.65 33.21
TraesCS5D01G464800.1 Wheat plastid 34.65 33.08
TraesCS1D01G375000.1 Wheat plastid 30.71 32.64
TraesCS7D01G199500.1 Wheat plastid 33.46 31.95
TraesCS5D01G329200.1 Wheat plastid 32.68 31.56
TraesCS1D01G428200.1 Wheat plastid 33.07 31.34
TraesCS4D01G086400.1 Wheat plastid 34.25 30.42
TraesCS2D01G209900.1 Wheat plastid 33.46 29.72
TraesCS1D01G375200.1 Wheat plastid 17.32 28.57
TraesCS5D01G182000.1 Wheat plastid 33.07 27.1
Protein Annotations
EnsemblPlants:TraesCS6D01G299200.1EnsemblPlantsGene:TraesCS6D01G299200Gene3D:1.10.3460.10GO:GO:0005575GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009765GO:GO:0009987GO:GO:0015979GO:GO:0016020InterPro:Chloro_AB-bd_pln
InterPro:Chloroa_b-bindInterPro:Chlorophyll_a/b-bd_dom_sfInterPro:IPR023329PANTHER:PTHR21649PANTHER:PTHR21649:SF23PFAM:PF00504
SUPFAM:SSF103511MapMan:1.1.4.1.5::::
Description
No Description!
Coordinates
chr6D:+:409663041..409664689
Molecular Weight (calculated)
27353.2 Da
IEP (calculated)
6.394
GRAVY (calculated)
0.098
Length
254 amino acids
Sequence
(BLAST)
001: MALAANAHGR VCTLSSRPPT PFGSRSMVTM PGHHVQARFA VRATAERATW LPGLDPPAYL DGTLPGDYGF DPLGLGEQPE DLKWYVQAEL VHCRFAMAGV
101: AGILGTDLIR VSGLGNLPVW FEAGATKFDF ANTTALFFVQ LLLMGFVETK RYMDFVNPGS QAKEGTFLGI EASLEGLQPG YPGGPLFNPM GLAKDIENAN
201: EVKLKEIKNG RLAMVAMLGF IVQASVTHAG PIENLLTHLS DPFNKNIIHA LTLS
Best Arabidopsis Sequence Match ( AT1G45474.2 )
(BLAST)
001: MAVVLRGGIT GGFLHHRRDA SSVITRRISS VKAAGGGINP TVAVERATWL PGLNPPPYLD GNLAGDYGFD PLGLGEDPES LKWYVQAELV HSRFAMLGVA
101: GILFTDLLRT TGIRNLPVWY EAGAVKFDFA STKTLIVVQF LLMGFAETKR YMDFVSPGSQ AKEGSFFFGL EAALEGLEPG YPGGPLLNPL GLAKDVQNAH
201: DWKLKEIKNG RLAMMAMLGF FVQASVTHTG PIDNLVEHLS NPWHKTIIQT LFTSTS
Arabidopsis Description
LHCA5Photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C639]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.