Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- mitochondrion 2
- plasma membrane 1
- extracellular 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g022900.2.1 | Tomato | plastid | 72.73 | 73.28 |
| AT1G45474.2 | Thale cress | mitochondrion | 69.32 | 71.48 |
| Bra014048.1-P | Field mustard | mitochondrion, plastid | 68.56 | 70.16 |
| CDY43213 | Canola | mitochondrion, plastid | 68.56 | 70.16 |
| CDY17055 | Canola | mitochondrion, plastid | 67.8 | 69.38 |
| KRH51989 | Soybean | nucleus | 73.11 | 67.72 |
| EES07574 | Sorghum | plastid | 67.8 | 67.29 |
| Zm00001d018157_P001 | Maize | plastid | 67.8 | 66.54 |
| TraesCS6D01G299200.1 | Wheat | plastid | 63.26 | 65.75 |
| GSMUA_Achr7P13020_001 | Banana | plastid | 67.05 | 65.07 |
| TraesCS6B01G350500.1 | Wheat | plastid | 63.26 | 64.98 |
| Os02t0764500-01 | Rice | plastid | 64.02 | 64.75 |
| TraesCS6A01G319700.1 | Wheat | plastid | 62.12 | 64.57 |
| PGSC0003DMT400011381 | Potato | plastid | 64.77 | 64.29 |
| TraesCS6B01G312900.1 | Wheat | plastid | 30.68 | 55.86 |
| KRH61286 | Soybean | mitochondrion | 43.18 | 52.05 |
| VIT_17s0000g06350.t01 | Wine grape | plastid | 42.42 | 44.44 |
| VIT_11s0016g00730.t01 | Wine grape | plastid | 39.02 | 39.77 |
| VIT_01s0010g03620.t01 | Wine grape | plastid | 38.64 | 37.64 |
| VIT_15s0024g00040.t01 | Wine grape | plastid | 37.88 | 36.5 |
| VIT_12s0055g01110.t01 | Wine grape | plastid | 35.23 | 36.19 |
| VIT_13s0019g04140.t01 | Wine grape | plastid | 31.44 | 34.02 |
| VIT_10s0003g02900.t01 | Wine grape | plastid | 31.82 | 31.82 |
| VIT_10s0003g02890.t01 | Wine grape | plastid | 31.82 | 31.82 |
| VIT_19s0014g00160.t01 | Wine grape | plastid | 31.82 | 31.46 |
| VIT_12s0028g00320.t01 | Wine grape | plastid | 31.82 | 31.11 |
| VIT_07s0005g02220.t01 | Wine grape | plastid | 30.3 | 30.42 |
| VIT_12s0057g00630.t01 | Wine grape | plastid | 29.92 | 29.81 |
| VIT_00s0181g00200.t01 | Wine grape | plastid | 30.3 | 29.74 |
| VIT_00s0181g00180.t01 | Wine grape | plastid | 30.3 | 29.74 |
| VIT_19s0014g03660.t01 | Wine grape | plastid | 29.92 | 29.7 |
| VIT_18s0122g00430.t01 | Wine grape | plastid | 29.92 | 23.87 |
| VIT_08s0007g02190.t01 | Wine grape | plastid | 30.68 | 23.68 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 31.82 | 20.9 |
Protein Annotations
| MapMan:1.1.4.1.5 | Gene3D:1.10.3460.10 | EntrezGene:100255844 | wikigene:100255844 | ProteinID:CBI19523 | ProteinID:CBI19523.3 |
| InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | UniProt:E0CP66 | EMBL:FN595227 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006091 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009409 |
| GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009644 | GO:GO:0009645 | GO:GO:0009765 | GO:GO:0009768 |
| GO:GO:0009782 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0031409 | GO:GO:0042803 |
| InterPro:IPR023329 | EntrezGene:LOC100255844 | wikigene:LOC100255844 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF23 |
| SUPFAM:SSF103511 | TIGR:TC59235 | UniParc:UPI00015C7919 | ArrayExpress:VIT_18s0001g10550 | EnsemblPlantsGene:VIT_18s0001g10550 | EnsemblPlants:VIT_18s0001g10550.t01 |
| unigene:Vvi.24418 | RefSeq:XP_002284724 | RefSeq:XP_002284724.1 | SEG:seg | : | : |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:E0CP66]
Coordinates
chr18:+:8871577..8873781
Molecular Weight (calculated)
28644.7 Da
IEP (calculated)
6.801
GRAVY (calculated)
0.072
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITVGTGFL VQPSSSLSLL GRKSCRPTLD VAYRFLPARP GPSRFSHGTV VQAQQRPTWL PGLDPPPYLN GTLAGDFGFD PLGLGEDPEN LRWYVQAELV
101: HARFAMAGVA GILVTDLLRV TGISNLPVWY EAGAVKFEFA STEALFIVQL ILMGFVETKR YMDFTNPGSQ AKEGSFFGLE AALEGLEPGY PGGPLLNPLG
201: LARDIKNAHD WKLKEIKNGR LAMVAMLGVF VQASVTHAGP IENLVEHLSN PWHKTIIQTI SSTS
101: HARFAMAGVA GILVTDLLRV TGISNLPVWY EAGAVKFEFA STEALFIVQL ILMGFVETKR YMDFTNPGSQ AKEGSFFGLE AALEGLEPGY PGGPLLNPLG
201: LARDIKNAHD WKLKEIKNGR LAMVAMLGVF VQASVTHAGP IENLVEHLSN PWHKTIIQTI SSTS
001: MAVVLRGGIT GGFLHHRRDA SSVITRRISS VKAAGGGINP TVAVERATWL PGLNPPPYLD GNLAGDYGFD PLGLGEDPES LKWYVQAELV HSRFAMLGVA
101: GILFTDLLRT TGIRNLPVWY EAGAVKFDFA STKTLIVVQF LLMGFAETKR YMDFVSPGSQ AKEGSFFFGL EAALEGLEPG YPGGPLLNPL GLAKDVQNAH
201: DWKLKEIKNG RLAMMAMLGF FVQASVTHTG PIDNLVEHLS NPWHKTIIQT LFTSTS
101: GILFTDLLRT TGIRNLPVWY EAGAVKFDFA STKTLIVVQF LLMGFAETKR YMDFVSPGSQ AKEGSFFFGL EAALEGLEPG YPGGPLLNPL GLAKDVQNAH
201: DWKLKEIKNG RLAMMAMLGF FVQASVTHTG PIDNLVEHLS NPWHKTIIQT LFTSTS
Arabidopsis Description
LHCA5Photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C639]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.