Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0181g00200.t01 | Wine grape | plastid | 99.63 | 99.63 |
| VIT_19s0014g03660.t01 | Wine grape | plastid | 92.19 | 93.23 |
| GSMUA_AchrUn_... | Banana | plastid | 78.44 | 91.34 |
| KRH27171 | Soybean | mitochondrion, nucleus, plastid | 90.33 | 90.67 |
| KRH22164 | Soybean | nucleus, plastid | 89.96 | 90.64 |
| GSMUA_Achr1P08770_001 | Banana | plastid, unclear | 79.18 | 88.38 |
| PGSC0003DMT400022072 | Potato | plastid | 86.99 | 88.3 |
| AT5G54270.1 | Thale cress | plastid | 86.62 | 87.92 |
| Bra002999.1-P | Field mustard | plastid | 86.25 | 87.55 |
| Solyc12g011450.1.1 | Tomato | plastid | 86.25 | 87.55 |
| Os07t0562700-01 | Rice | extracellular, plastid | 84.39 | 85.34 |
| TraesCS1B01G451100.1 | Wheat | plastid | 81.78 | 82.09 |
| TraesCS1D01G428200.1 | Wheat | plastid | 81.78 | 82.09 |
| TraesCS2A01G204800.1 | Wheat | plastid | 81.78 | 82.09 |
| HORVU2Hr1G040780.7 | Barley | plastid | 80.67 | 79.78 |
| VIT_12s0057g00630.t01 | Wine grape | plastid | 70.63 | 71.7 |
| VIT_07s0005g02220.t01 | Wine grape | plastid | 68.4 | 69.96 |
| VIT_10s0003g02900.t01 | Wine grape | plastid | 68.4 | 69.7 |
| VIT_19s0014g00160.t01 | Wine grape | plastid | 69.14 | 69.66 |
| VIT_12s0028g00320.t01 | Wine grape | plastid | 69.89 | 69.63 |
| VIT_10s0003g02890.t01 | Wine grape | plastid | 67.66 | 68.94 |
| VIT_13s0019g04140.t01 | Wine grape | plastid | 31.23 | 34.43 |
| VIT_15s0024g00040.t01 | Wine grape | plastid | 34.94 | 34.31 |
| VIT_18s0122g00430.t01 | Wine grape | plastid | 40.89 | 33.23 |
| VIT_11s0016g00730.t01 | Wine grape | plastid | 31.97 | 33.2 |
| VIT_17s0000g06350.t01 | Wine grape | plastid | 29.37 | 31.35 |
| VIT_18s0001g10550.t01 | Wine grape | plastid | 29.74 | 30.3 |
| VIT_01s0010g03620.t01 | Wine grape | plastid | 30.11 | 29.89 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 43.12 | 28.86 |
| VIT_12s0055g01110.t01 | Wine grape | plastid | 26.77 | 28.02 |
| VIT_08s0007g02190.t01 | Wine grape | plastid | 31.97 | 25.15 |
Protein Annotations
| MapMan:1.1.1.1.1 | Gene3D:1.10.3460.10 | EntrezGene:100854348 | wikigene:100854348 | ProteinID:CCB48279 | ProteinID:CCB48279.1 |
| InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | UniProt:F6H7T7 | EMBL:FN595252 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 |
| GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009765 |
| GO:GO:0009768 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0031409 | InterPro:IPR023329 |
| EntrezGene:LOC100854348 | wikigene:LOC100854348 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF11 | SUPFAM:SSF103511 |
| TIGR:TC66352 | UniParc:UPI00019861A3 | ArrayExpress:VIT_00s0181g00180 | EnsemblPlantsGene:VIT_00s0181g00180 | EnsemblPlants:VIT_00s0181g00180.t01 | unigene:Vvi.3681 |
| RefSeq:XP_003634999 | RefSeq:XP_003634999.1 | SEG:seg | : | : | : |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6H7T7]
Coordinates
chrUn:+:7830802..7831816
Molecular Weight (calculated)
29050.8 Da
IEP (calculated)
4.897
GRAVY (calculated)
0.004
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MVATVMAATA SSSTGLRPTQ FLGQTRGSNA NQLREVVPMG TGKFTMGNEL WYGPDRVKYL GPFSAQTPSY LTGEFPGDYG WDTAGLSADP EAFARNRALE
101: VIHGRWAMLG AFGCITPEVL EKWVKVDFKE PVWFKAGAQI FSEGGLDYLG NPNLVHAQSI LAVLGFQVVL MGLVEGYRIN GLPGVGEGND LYPGGPYFDP
201: LGLADDPVTF AELKVKEIKN GRLAMFSMFG FFVQAIVTGK GPLENLLDHL DNPVANNAWA YATKFVPGS
101: VIHGRWAMLG AFGCITPEVL EKWVKVDFKE PVWFKAGAQI FSEGGLDYLG NPNLVHAQSI LAVLGFQVVL MGLVEGYRIN GLPGVGEGND LYPGGPYFDP
201: LGLADDPVTF AELKVKEIKN GRLAMFSMFG FFVQAIVTGK GPLENLLDHL DNPVANNAWA YATKFVPGS
001: MASTFTSSSS VLTPTTFLGQ TKASSFNPLR DVVSLGSPKY TMGNDLWYGP DRVKYLGPFS VQTPSYLTGE FPGDYGWDTA GLSADPEAFA KNRALEVIHG
101: RWAMLGAFGC ITPEVLQKWV RVDFKEPVWF KAGSQIFSEG GLDYLGNPNL VHAQSILAVL GFQVILMGLV EGFRINGLDG VGEGNDLYPG GQYFDPLGLA
201: DDPVTFAELK VKEIKNGRLA MFSMFGFFVQ AIVTGKGPLE NLLDHLDNPV ANNAWAFATK FAPGA
101: RWAMLGAFGC ITPEVLQKWV RVDFKEPVWF KAGSQIFSEG GLDYLGNPNL VHAQSILAVL GFQVILMGLV EGFRINGLDG VGEGNDLYPG GQYFDPLGLA
201: DDPVTFAELK VKEIKNGRLA MFSMFGFFVQ AIVTGKGPLE NLLDHLDNPV ANNAWAFATK FAPGA
Arabidopsis Description
LHCB3Chlorophyll a-b binding protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7M0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.