Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74072 | Soybean | mitochondrion, nucleus, plastid | 89.05 | 88.41 |
| KRH14048 | Soybean | nucleus, plastid | 88.69 | 88.04 |
| AT1G61520.1 | Thale cress | plastid | 86.5 | 86.81 |
| CDY12903 | Canola | plastid | 85.77 | 86.72 |
| Solyc12g011280.1.1 | Tomato | plastid | 86.13 | 86.45 |
| Bra027083.1-P | Field mustard | plastid | 85.4 | 86.35 |
| CDY15020 | Canola | plastid | 85.4 | 86.35 |
| CDY57375 | Canola | plastid | 85.4 | 86.35 |
| PGSC0003DMT400054836 | Potato | plastid | 85.77 | 86.08 |
| PGSC0003DMT400020100 | Potato | plastid | 85.77 | 86.08 |
| Solyc10g007690.2.1 | Tomato | plastid | 85.04 | 85.35 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 29.56 | 85.26 |
| CDY03835 | Canola | plastid | 84.67 | 84.98 |
| CDY47581 | Canola | plastid | 84.67 | 84.98 |
| Bra031427.1-P | Field mustard | plastid | 84.31 | 84.62 |
| Zm00001d046786_P001 | Maize | plastid | 81.75 | 83.9 |
| CDY26347 | Canola | plastid | 76.28 | 81.96 |
| KXG20345 | Sorghum | plastid | 79.2 | 81.89 |
| TraesCS6A01G159800.1 | Wheat | plastid | 77.37 | 78.81 |
| TraesCS6B01G191500.1 | Wheat | plastid | 77.37 | 78.81 |
| TraesCS6D01G152700.1 | Wheat | golgi | 77.37 | 78.81 |
| Os02t0197600-01 | Rice | plastid | 77.37 | 78.81 |
| Bra038584.1-P | Field mustard | plastid | 74.09 | 70.73 |
| VIT_11s0016g00730.t01 | Wine grape | plastid | 38.32 | 40.54 |
| VIT_17s0000g06350.t01 | Wine grape | plastid | 36.86 | 40.08 |
| VIT_01s0010g03620.t01 | Wine grape | plastid | 37.59 | 38.01 |
| VIT_18s0001g10550.t01 | Wine grape | plastid | 36.5 | 37.88 |
| VIT_19s0014g00160.t01 | Wine grape | plastid | 34.67 | 35.58 |
| VIT_19s0014g03660.t01 | Wine grape | plastid | 34.31 | 35.34 |
| VIT_00s0181g00180.t01 | Wine grape | plastid | 34.31 | 34.94 |
| VIT_00s0181g00200.t01 | Wine grape | plastid | 34.31 | 34.94 |
| VIT_10s0003g02900.t01 | Wine grape | plastid | 33.58 | 34.85 |
| VIT_10s0003g02890.t01 | Wine grape | plastid | 33.58 | 34.85 |
| VIT_13s0019g04140.t01 | Wine grape | plastid | 30.66 | 34.43 |
| VIT_12s0057g00630.t01 | Wine grape | plastid | 32.48 | 33.58 |
| VIT_12s0028g00320.t01 | Wine grape | plastid | 32.85 | 33.33 |
| VIT_07s0005g02220.t01 | Wine grape | plastid | 31.75 | 33.08 |
| VIT_12s0055g01110.t01 | Wine grape | plastid | 27.37 | 29.18 |
| VIT_18s0122g00430.t01 | Wine grape | plastid | 32.12 | 26.59 |
| VIT_08s0007g02190.t01 | Wine grape | plastid | 30.66 | 24.56 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 33.58 | 22.89 |
Protein Annotations
| MapMan:1.1.4.1.3 | Gene3D:1.10.3460.10 | EntrezGene:100232927 | wikigene:100232927 | ProteinID:AAP35043 | ProteinID:AAP35043.1 |
| EMBL:AY194366 | ProteinID:CCB62207 | ProteinID:CCB62207.1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf |
| UniProt:F6I5I9 | EMBL:FN596748 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009765 | GO:GO:0009768 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 |
| GO:GO:0019538 | GO:GO:0031409 | InterPro:IPR023329 | EntrezGene:LHCA3 | wikigene:LHCA3 | PFAM:PF00504 |
| PANTHER:PTHR21649 | PANTHER:PTHR21649:SF14 | SUPFAM:SSF103511 | TIGR:TC57974 | TIGR:TC62932 | UniParc:UPI00015CA42D |
| ArrayExpress:VIT_15s0024g00040 | EnsemblPlantsGene:VIT_15s0024g00040 | EnsemblPlants:VIT_15s0024g00040.t01 | RefSeq:XP_002273201 | RefSeq:XP_002273201.1 | SEG:seg |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F6I5I9]
Coordinates
chr15:+:124100..125350
Molecular Weight (calculated)
29531.5 Da
IEP (calculated)
8.659
GRAVY (calculated)
-0.107
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQALVSSS LTSSVETARQ ILGSRPLQSP SRKSSSFVVR AASTPPVKQG ADRPLWFASK QSLTYLDGSL PGDYGFDPLG LSDPEGTGGF IEPRWLAYGE
101: VINGRYAMLG AVGAIAPEIL GKLGLIPPET ALPWFKTGVF PPAGTYNYWA DPYTLFVFEM ALMGFAEHRR FQDWANPGSM GKQYFLGLEK YLGGSGDPAY
201: PGGPLFNPLG FGKDEKSLKD LKLKEVKNGR LAMLAILGYF AQGPVTGVGP LQNLLDHLAD PVNNNIITSL KFHN
101: VINGRYAMLG AVGAIAPEIL GKLGLIPPET ALPWFKTGVF PPAGTYNYWA DPYTLFVFEM ALMGFAEHRR FQDWANPGSM GKQYFLGLEK YLGGSGDPAY
201: PGGPLFNPLG FGKDEKSLKD LKLKEVKNGR LAMLAILGYF AQGPVTGVGP LQNLLDHLAD PVNNNIITSL KFHN
001: MAAQALVSSS LTSSVQTARQ IFGSKPVASA SQKKSSFVVK AAATPPVKQG ANRPLWFASS QSLSYLDGSL PGDYGFDPLG LSDPEGTGGF IEPRWLAYGE
101: IINGRFAMLG AAGAIAPEIL GKAGLIPAET ALPWFQTGVI PPAGTYTYWA DNYTLFVLEM ALMGFAEHRR LQDWYNPGSM GKQYFLGLEK GLAGSGNPAY
201: PGGPFFNPLG FGKDEKSLKE LKLKEVKNGR LAMLAILGYF IQGLVTGVGP YQNLLDHLAD PVNNNVLTSL KFH
101: IINGRFAMLG AAGAIAPEIL GKAGLIPAET ALPWFQTGVI PPAGTYTYWA DNYTLFVLEM ALMGFAEHRR LQDWYNPGSM GKQYFLGLEK GLAGSGNPAY
201: PGGPFFNPLG FGKDEKSLKE LKLKEVKNGR LAMLAILGYF IQGLVTGVGP YQNLLDHLAD PVNNNVLTSL KFH
Arabidopsis Description
LHCA3Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178W5Y6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.