Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035006 | Potato | cytosol, extracellular, vacuole | 56.67 | 95.62 |
| PGSC0003DMT400035007 | Potato | cytosol, extracellular, vacuole | 56.67 | 95.62 |
| VIT_19s0014g00160.t01 | Wine grape | plastid | 91.11 | 92.13 |
| VIT_10s0003g02890.t01 | Wine grape | plastid | 89.63 | 91.67 |
| VIT_10s0003g02900.t01 | Wine grape | plastid | 88.89 | 90.91 |
| TraesCS6B01G122700.1 | Wheat | mitochondrion, plastid | 71.11 | 90.57 |
| TraesCS6B01G122500.1 | Wheat | cytosol, extracellular, plastid | 53.33 | 90.0 |
| VIT_07s0005g02220.t01 | Wine grape | plastid | 87.04 | 89.35 |
| Os01t0720500-01 | Rice | plastid | 86.67 | 88.3 |
| TraesCS1B01G317500.1 | Wheat | plastid | 50.0 | 88.24 |
| TraesCS1A01G403300.1 | Wheat | plastid | 86.67 | 87.97 |
| TraesCS5B01G463100.1 | Wheat | plastid | 86.67 | 87.97 |
| TraesCS1B01G432700.1 | Wheat | plastid | 86.67 | 87.97 |
| TraesCS5D01G464700.1 | Wheat | plastid | 86.3 | 87.59 |
| TraesCS1D01G411300.1 | Wheat | plastid | 86.3 | 87.59 |
| TraesCS5B01G462800.1 | Wheat | plastid | 86.3 | 87.59 |
| TraesCSU01G167700.1 | Wheat | plastid | 85.93 | 87.55 |
| TraesCS1B01G433300.1 | Wheat | plastid | 85.93 | 87.22 |
| TraesCS5B01G463000.1 | Wheat | plastid | 85.93 | 87.22 |
| TraesCS1D01G411600.1 | Wheat | plastid | 85.93 | 87.22 |
| TraesCS5A01G454300.1 | Wheat | plastid | 85.93 | 87.22 |
| TraesCS1D01G374900.1 | Wheat | plastid | 85.56 | 87.17 |
| TraesCS1D01G375100.1 | Wheat | plastid | 85.56 | 87.17 |
| TraesCS5D01G464900.1 | Wheat | plastid | 85.56 | 86.84 |
| TraesCS5A01G454200.1 | Wheat | plastid | 85.56 | 86.84 |
| TraesCSU01G250000.1 | Wheat | plastid | 85.56 | 86.84 |
| TraesCS6D01G088800.1 | Wheat | plastid | 85.56 | 86.84 |
| TraesCS1B01G388200.1 | Wheat | plastid | 85.19 | 86.79 |
| TraesCS6A01G094600.1 | Wheat | plastid | 82.22 | 86.72 |
| TraesCS1A01G403800.1 | Wheat | plastid | 85.19 | 86.47 |
| TraesCS5D01G464800.1 | Wheat | plastid | 85.19 | 86.47 |
| TraesCS6A01G094100.1 | Wheat | plastid | 84.81 | 86.09 |
| TraesCS7B01G103300.1 | Wheat | plastid | 84.81 | 86.09 |
| EES01022 | Sorghum | plastid | 84.44 | 86.04 |
| TraesCS1B01G388500.1 | Wheat | plastid | 84.44 | 86.04 |
| TraesCS1D01G375000.1 | Wheat | plastid | 75.93 | 85.77 |
| TraesCS6A01G093700.1 | Wheat | plastid | 84.44 | 85.71 |
| TraesCS6A01G094300.1 | Wheat | plastid | 84.44 | 85.71 |
| TraesCS6B01G122800.1 | Wheat | plastid | 84.44 | 85.71 |
| TraesCS7D01G199400.1 | Wheat | plastid | 84.44 | 85.71 |
| TraesCS7B01G103400.1 | Wheat | plastid | 84.07 | 85.34 |
| TraesCS5D01G357600.1 | Wheat | plastid | 83.7 | 85.28 |
| TraesCS5B01G353200.1 | Wheat | plastid | 83.7 | 85.28 |
| TraesCS5A01G350600.1 | Wheat | plastid | 83.7 | 85.28 |
| TraesCS1B01G388300.1 | Wheat | plastid | 83.7 | 85.28 |
| Zm00001d011285_P001 | Maize | plastid | 83.33 | 85.23 |
| Zm00001d044399_P001 | Maize | plastid | 83.33 | 85.23 |
| Zm00001d044401_P001 | Maize | plastid | 83.33 | 85.23 |
| Zm00001d044402_P001 | Maize | plastid | 83.33 | 85.23 |
| OQU87124 | Sorghum | plastid | 83.33 | 85.23 |
| TraesCS7A01G238400.1 | Wheat | plastid | 83.7 | 84.96 |
| Zm00001d044396_P001 | Maize | plastid | 82.96 | 84.85 |
| TraesCS6D01G088600.1 | Wheat | plastid | 83.33 | 84.59 |
| TraesCS5B01G462900.1 | Wheat | plastid | 63.7 | 84.31 |
| TraesCS7D01G199500.1 | Wheat | plastid | 82.59 | 83.83 |
| TraesCS6D01G088700.1 | Wheat | plastid | 71.11 | 83.48 |
| TraesCS6B01G122600.1 | Wheat | plastid | 82.22 | 83.46 |
| PGSC0003DMT400034902 | Potato | plastid | 40.37 | 83.21 |
| TraesCS7A01G237100.1 | Wheat | plastid | 80.74 | 81.95 |
| VIT_12s0057g00630.t01 | Wine grape | plastid | 77.78 | 79.25 |
| TraesCS6A01G094500.1 | Wheat | plastid | 84.44 | 74.75 |
| TraesCS6A01G094200.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 85.19 | 70.34 |
| VIT_00s0181g00200.t01 | Wine grape | plastid | 69.63 | 69.89 |
| VIT_00s0181g00180.t01 | Wine grape | plastid | 69.63 | 69.89 |
| TraesCS1D01G375200.1 | Wheat | plastid | 39.63 | 69.48 |
| VIT_19s0014g03660.t01 | Wine grape | plastid | 67.78 | 68.8 |
| TraesCS6A01G094400.1 | Wheat | plastid | 84.81 | 68.77 |
| KXG33266 | Sorghum | extracellular | 47.04 | 54.98 |
| VIT_13s0019g04140.t01 | Wine grape | plastid | 35.93 | 39.75 |
| VIT_11s0016g00730.t01 | Wine grape | plastid | 34.81 | 36.29 |
| VIT_18s0122g00430.t01 | Wine grape | plastid | 42.59 | 34.74 |
| VIT_01s0010g03620.t01 | Wine grape | plastid | 34.81 | 34.69 |
| VIT_17s0000g06350.t01 | Wine grape | plastid | 31.48 | 33.73 |
| VIT_15s0024g00040.t01 | Wine grape | plastid | 33.33 | 32.85 |
| VIT_18s0001g10550.t01 | Wine grape | plastid | 31.11 | 31.82 |
| VIT_12s0055g01110.t01 | Wine grape | plastid | 29.63 | 31.13 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 45.19 | 30.35 |
| VIT_08s0007g02190.t01 | Wine grape | plastid | 33.7 | 26.61 |
Protein Annotations
| MapMan:1.1.1.1.1 | Gene3D:1.10.3460.10 | EntrezGene:100250504 | wikigene:100250504 | UniProt:A5BPB2 | EMBL:AM466423 |
| ProteinID:CAN74831 | ProteinID:CAN74831.1 | ProteinID:CCB47466 | ProteinID:CCB47466.1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind |
| InterPro:Chlorophyll_a/b-bd_dom_sf | EMBL:FN595235 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009765 | GO:GO:0009768 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 |
| GO:GO:0019538 | GO:GO:0031409 | InterPro:IPR023329 | EntrezGene:LOC100250504 | wikigene:LOC100250504 | PFAM:PF00504 |
| PANTHER:PTHR21649 | PANTHER:PTHR21649:SF55 | SUPFAM:SSF103511 | TIGR:TC53732 | TIGR:TC66509 | UniParc:UPI0001521741 |
| ArrayExpress:VIT_12s0028g00320 | EnsemblPlantsGene:VIT_12s0028g00320 | EnsemblPlants:VIT_12s0028g00320.t01 | RefSeq:XP_002283566 | RefSeq:XP_002283566.1 | SEG:seg |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A5BPB2]
Coordinates
chr12:-:931774..932592
Molecular Weight (calculated)
28694.2 Da
IEP (calculated)
4.918
GRAVY (calculated)
0.001
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSTMALS SPSLAGQAVK LAPNVTELLA GDQGRVTMRK SVAKSKAVSS GSPWYGPDRV KYLGPFSGEP PSYLTGEFPG DYGWDTAGLS ADPETFAKNR
101: ELEVIHCRWA MLGALGCVFP ELLSRNGVKF GEAVWFKAGA QIFSEGGLDY LGNPNLVHAQ SILAIWATQV ILMGAVEGYR IAGGPLGEVT DPLYPGGSFD
201: PLGLADDPEA FAELKVKEIK NGRLAMFSMF GFFVQAIVTG KGPLENLADH LADPVNNNAW AYATNFVPGK
101: ELEVIHCRWA MLGALGCVFP ELLSRNGVKF GEAVWFKAGA QIFSEGGLDY LGNPNLVHAQ SILAIWATQV ILMGAVEGYR IAGGPLGEVT DPLYPGGSFD
201: PLGLADDPEA FAELKVKEIK NGRLAMFSMF GFFVQAIVTG KGPLENLADH LADPVNNNAW AYATNFVPGK
001: MAASTMALSS PAFAGKAVKL SPAASEVLGS GRVTMRKTVA KPKGPSGSPW YGSDRVKYLG PFSGESPSYL TGEFPGDYGW DTAGLSADPE TFARNRELEV
101: IHSRWAMLGA LGCVFPELLA RNGVKFGEAV WFKAGSQIFS DGGLDYLGNP SLVHAQSILA IWATQVILMG AVEGYRVAGN GPLGEAEDLL YPGGSFDPLG
201: LATDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP IENLADHLAD PVNNNAWAFA TNFVPGK
101: IHSRWAMLGA LGCVFPELLA RNGVKFGEAV WFKAGSQIFS DGGLDYLGNP SLVHAQSILA IWATQVILMG AVEGYRVAGN GPLGEAEDLL YPGGSFDPLG
201: LATDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP IENLADHLAD PVNNNAWAFA TNFVPGK
Arabidopsis Description
LHCB1.3Chlorophyll a-b binding protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P04778]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.