Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P14960_001 | Banana | plastid | 88.89 | 89.24 |
| KRH54568 | Soybean | nucleus, plastid | 88.1 | 88.1 |
| KRH63318 | Soybean | plastid | 87.3 | 87.3 |
| Solyc06g069730.2.1 | Tomato | plastid | 85.71 | 86.4 |
| PGSC0003DMT400083158 | Potato | plastid | 85.71 | 86.4 |
| GSMUA_Achr4P24090_001 | Banana | unclear | 86.11 | 86.11 |
| Bra018144.1-P | Field mustard | plastid | 85.32 | 85.32 |
| CDX99044 | Canola | plastid | 85.32 | 85.32 |
| CDY47410 | Canola | plastid | 85.32 | 85.32 |
| AT3G47470.1 | Thale cress | plastid | 84.13 | 84.46 |
| Zm00001d050403_P001 | Maize | plastid | 79.37 | 81.97 |
| Zm00001d032197_P001 | Maize | plastid | 78.57 | 80.16 |
| KXG25214 | Sorghum | plastid | 78.97 | 79.28 |
| Os08t0435900-01 | Rice | mitochondrion | 76.59 | 79.1 |
| HORVU5Hr1G066280.1 | Barley | plastid | 73.41 | 75.51 |
| TraesCS5A01G229300.1 | Wheat | mitochondrion, plastid | 73.41 | 75.51 |
| TraesCS5B01G227900.1 | Wheat | plastid | 73.41 | 75.51 |
| TraesCS5D01G238300.1 | Wheat | mitochondrion, plastid | 73.02 | 75.1 |
| VIT_01s0010g03620.t01 | Wine grape | plastid | 49.21 | 45.76 |
| VIT_11s0016g00730.t01 | Wine grape | plastid | 45.24 | 44.02 |
| VIT_18s0001g10550.t01 | Wine grape | plastid | 44.44 | 42.42 |
| VIT_13s0019g04140.t01 | Wine grape | plastid | 36.9 | 38.11 |
| VIT_15s0024g00040.t01 | Wine grape | plastid | 40.08 | 36.86 |
| VIT_12s0055g01110.t01 | Wine grape | plastid | 35.71 | 35.02 |
| VIT_10s0003g02900.t01 | Wine grape | plastid | 33.73 | 32.2 |
| VIT_10s0003g02890.t01 | Wine grape | plastid | 33.33 | 31.82 |
| VIT_12s0028g00320.t01 | Wine grape | plastid | 33.73 | 31.48 |
| VIT_19s0014g00160.t01 | Wine grape | plastid | 33.33 | 31.46 |
| VIT_07s0005g02220.t01 | Wine grape | plastid | 32.54 | 31.18 |
| VIT_19s0014g03660.t01 | Wine grape | plastid | 31.35 | 29.7 |
| VIT_00s0181g00200.t01 | Wine grape | plastid | 31.35 | 29.37 |
| VIT_00s0181g00180.t01 | Wine grape | plastid | 31.35 | 29.37 |
| VIT_12s0057g00630.t01 | Wine grape | plastid | 30.56 | 29.06 |
| VIT_08s0007g02190.t01 | Wine grape | plastid | 34.92 | 25.73 |
| VIT_18s0122g00430.t01 | Wine grape | plastid | 33.73 | 25.68 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 33.73 | 21.14 |
Protein Annotations
| MapMan:1.1.4.1.4 | Gene3D:1.10.3460.10 | EntrezGene:100232934 | wikigene:100232934 | UniProt:A5AEI0 | ProteinID:AAP69815 |
| ProteinID:AAP69815.1 | EMBL:AM424542 | EMBL:AY233205 | ProteinID:CAN79984 | ProteinID:CAN79984.1 | ProteinID:CCB43079 |
| ProteinID:CCB43079.1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | EMBL:FN594950 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 |
| GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009765 |
| GO:GO:0009768 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0031409 | InterPro:IPR023329 |
| EntrezGene:LHCA1 | wikigene:LHCA1 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF4 | SUPFAM:SSF103511 |
| TIGR:TC52113 | TIGR:TC55085 | TIGR:TC56028 | UniParc:UPI00015239F7 | ArrayExpress:VIT_17s0000g06350 | EnsemblPlantsGene:VIT_17s0000g06350 |
| EnsemblPlants:VIT_17s0000g06350.t01 | unigene:Vvi.7049 | RefSeq:XP_002284856 | RefSeq:XP_002284856.1 | : | : |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A5AEI0]
Coordinates
chr17:-:6886280..6887463
Molecular Weight (calculated)
27868.3 Da
IEP (calculated)
6.960
GRAVY (calculated)
-0.171
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVTTQASA AVFRPCASKS RFLTGSSGKL GREVSVKPMT SSSYRSFKVE AKKGEWLPGL SSPSYLDGSL PGDNGFDPLG LAEDPENLKW YVQAELVNSR
101: WAMLGVAGML LPEVFTKIGI INAPQWYDAG KAEYFASSST LFVIEFILFH YVEIRRWQDI KNPGSVNQDP IFKNYSLPPN EVGYPGGIFN PLNFAPTEEA
201: KEKELANGRL AMLAFLGFIV QHNVTGKGPF DNLLQHISDP WHNTIIQTLR GF
101: WAMLGVAGML LPEVFTKIGI INAPQWYDAG KAEYFASSST LFVIEFILFH YVEIRRWQDI KNPGSVNQDP IFKNYSLPPN EVGYPGGIFN PLNFAPTEEA
201: KEKELANGRL AMLAFLGFIV QHNVTGKGPF DNLLQHISDP WHNTIIQTLR GF
001: MATVTTHASA SIFRPCTSKP RFLTGSSGRL NRDLSFTSIG SSAKTSSFKV EAKKGEWLPG LASPDYLTGS LAGDNGFDPL GLAEDPENLK WFVQAELVNG
101: RWAMLGVAGM LLPEVFTKIG IINVPEWYDA GKEQYFASSS TLFVIEFILF HYVEIRRWQD IKNPGSVNQD PIFKQYSLPK GEVGYPGGIF NPLNFAPTQE
201: AKEKELANGR LAMLAFLGFV VQHNVTGKGP FENLLQHLSD PWHNTIVQTF N
101: RWAMLGVAGM LLPEVFTKIG IINVPEWYDA GKEQYFASSS TLFVIEFILF HYVEIRRWQD IKNPGSVNQD PIFKQYSLPK GEVGYPGGIF NPLNFAPTQE
201: AKEKELANGR LAMLAFLGFV VQHNVTGKGP FENLLQHLSD PWHNTIVQTF N
Arabidopsis Description
LHCA4Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178VEE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.