Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23903 | Soybean | nucleus, plastid | 67.19 | 69.35 |
| KRH39906 | Soybean | mitochondrion, plastid | 67.71 | 69.15 |
| VIT_13s0064g00160.t01 | Wine grape | plastid | 66.93 | 67.63 |
| Solyc01g087750.2.1 | Tomato | nucleus, plastid | 61.98 | 62.63 |
| PGSC0003DMT400017452 | Potato | plastid | 61.2 | 61.84 |
| KRG88973 | Soybean | plastid | 53.65 | 52.42 |
| VIT_08s0007g01250.t01 | Wine grape | cytosol | 24.74 | 25.47 |
| VIT_08s0056g00560.t01 | Wine grape | plastid | 22.4 | 24.5 |
| VIT_06s0061g01160.t01 | Wine grape | plastid | 24.22 | 22.74 |
| VIT_13s0067g02090.t01 | Wine grape | mitochondrion, plastid | 34.11 | 17.49 |
| VIT_12s0034g01330.t01 | Wine grape | cytosol | 8.59 | 15.79 |
| VIT_12s0034g01370.t01 | Wine grape | plastid | 19.79 | 14.59 |
Protein Annotations
| ArrayExpress:VIT_06s0004g02400 | EMBL:FN594951 | EnsemblPlants:VIT_06s0004g02400.t01 | EnsemblPlantsGene:VIT_06s0004g02400 | EntrezGene:100265633 | EntrezGene:LOC100265633 |
| InterPro:RETICULATA-related | PANTHER:PTHR31620 | PANTHER:PTHR31620:SF11 | PFAM:PF11891 | ProteinID:CCB43697 | ProteinID:CCB43697.1 |
| RefSeq:XP_002285363 | RefSeq:XP_002285363.1 | SEG:seg | TIGR:TC64909 | unigene:Vvi.9619 | UniParc:UPI00015C81D5 |
| UniProt:F6GU33 | wikigene:100265633 | wikigene:LOC100265633 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6:+:2854568..2862089
Molecular Weight (calculated)
40857.5 Da
IEP (calculated)
8.789
GRAVY (calculated)
0.225
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAAGFEPI TAAVSGAASL PKLHLHRPST PPTISFRTAL IFSPISSRSP RRRTPAMPLF SSGGGGGING MGNSGGGSGG DDDVGGGGGH DDKNNKKAAV
101: LVLAEMGRSL ESVPKDLAAA IESGKIPAAI VEKYLELEKS AVFRWLLQFG GFRERLLADD LFLAKVAMEC GVGIFTKTAA EYERRRENFF KELDFVIADV
201: VMAIIADFML VWLPAPTVSL RPPLAVSAGA IAKFFHSCPE NAFQVALAGT SFSFLQRIGA IVRNGSKLFA VGTTSSLVGT LVTNAIINAR KAVDSSSAGE
301: VEDVPVLSTS VAYGVYMAIS SNLRYQVVAG VVEQRILEPM LHKHKLLLSA LCFAVRTGNT FLGSLLWVDY ARWVGVQKVQ EDHE
101: LVLAEMGRSL ESVPKDLAAA IESGKIPAAI VEKYLELEKS AVFRWLLQFG GFRERLLADD LFLAKVAMEC GVGIFTKTAA EYERRRENFF KELDFVIADV
201: VMAIIADFML VWLPAPTVSL RPPLAVSAGA IAKFFHSCPE NAFQVALAGT SFSFLQRIGA IVRNGSKLFA VGTTSSLVGT LVTNAIINAR KAVDSSSAGE
301: VEDVPVLSTS VAYGVYMAIS SNLRYQVVAG VVEQRILEPM LHKHKLLLSA LCFAVRTGNT FLGSLLWVDY ARWVGVQKVQ EDHE
001: MAIASCFFCV PTPNTAISES NLTWPHIASF PRLSSSSSFN GVISAKSISF NRRVPITPVL SASSGNGGSD NNGGGLSGGG GGGDGGKNDG DGHGDEDRDR
101: NRNEAMLLLK ESGIELESLP KDLAAAIEAG RIPGSVITRF LELQKSAVMR WLMQFGGFRE RLLADDLFMA KLAMECGVGI FTKTAAEYER RRENFFNELE
201: VVFADVAMAI IADFMLVYLP APTVSLRPPL ALTAGGISKF FHNCPDNAFQ VALSGTSYTL LQRLGAITRN GAKLFAVGTT SSLVGTAITN AFIKARKAVD
301: QNSEGEVETV PIVSTSVAYG VYMAVSSNLR YQIVAGVIEQ RLLEPMLHQH KLALSALCFA VRTGNTFLGS LLWVDYARLI GIQKSH
101: NRNEAMLLLK ESGIELESLP KDLAAAIEAG RIPGSVITRF LELQKSAVMR WLMQFGGFRE RLLADDLFMA KLAMECGVGI FTKTAAEYER RRENFFNELE
201: VVFADVAMAI IADFMLVYLP APTVSLRPPL ALTAGGISKF FHNCPDNAFQ VALSGTSYTL LQRLGAITRN GAKLFAVGTT SSLVGTAITN AFIKARKAVD
301: QNSEGEVETV PIVSTSVAYG VYMAVSSNLR YQIVAGVIEQ RLLEPMLHQH KLALSALCFA VRTGNTFLGS LLWVDYARLI GIQKSH
Arabidopsis Description
RER4Protein RETICULATA-RELATED 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94CJ5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.