Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96754 Canola plastid 86.79 90.98
Bra016589.1-P Field mustard plastid 86.64 90.82
CDX83893 Canola plastid 86.64 90.68
KRH44645 Soybean nucleus 71.58 75.04
KRH47008 Soybean endoplasmic reticulum 71.74 74.96
VIT_09s0018g01870.t01 Wine grape plastid 70.66 73.72
Solyc03g123830.2.1 Tomato plastid 70.97 73.68
PGSC0003DMT400023675 Potato plastid 71.89 73.35
GSMUA_Achr10P... Banana plastid 68.05 71.92
AT4G34200.1 Thale cress plastid 65.59 70.81
GSMUA_Achr3P27990_001 Banana plastid 66.51 70.41
AT3G19480.1 Thale cress plastid 63.44 70.24
GSMUA_Achr9P22790_001 Banana plastid 55.45 68.76
AT1G12550.1 Thale cress cytosol 13.21 26.63
AT1G79870.1 Thale cress cytosol 12.29 25.56
AT1G68010.2 Thale cress cytosol 15.05 25.32
AT2G45630.2 Thale cress plastid 13.06 25.15
AT1G72190.1 Thale cress mitochondrion 13.67 23.86
AT5G14780.1 Thale cress mitochondrion 13.06 22.14
Protein Annotations
Gene3D:3.30.1330.90Gene3D:3.30.70.260Gene3D:3.40.50.720MapMan:4.1.4.1.1EntrezGene:838352InterPro:ACT_dom
ProteinID:AEE29631.1InterPro:ASB_dom_sfArrayExpress:AT1G17745EnsemblPlantsGene:AT1G17745RefSeq:AT1G17745TAIR:AT1G17745
RefSeq:AT1G17745-TAIR-GEnsemblPlants:AT1G17745.2TAIR:AT1G17745.2Unigene:At.21252InterPro:D-isomer_2_OHA_DH_cat_domInterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1InterPro:D-isomer_DH_NAD-bdGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016616GO:GO:0051287GO:GO:0055114InterPro:IPR002912
InterPro:IPR029009InterPro:NAD(P)-bd_dom_sfRefSeq:NP_001031061.2PFAM:PF00389PFAM:PF01842PFAM:PF02826
Symbol:PGDHPO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001170PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00065ScanProsite:PS00670
ScanProsite:PS00671PFscan:PS51671PANTHER:PTHR42938PANTHER:PTHR42938:SF14SUPFAM:SSF143548SUPFAM:SSF51735
SUPFAM:SSF52283SUPFAM:SSF55021UniParc:UPI0001E92B2ESEG:seg::
Description
PGDHD-3-phosphoglycerate dehydrogenase [Source:TAIR;Acc:AT1G17745]
Coordinates
chr1:+:6101015..6105241
Molecular Weight (calculated)
69737.8 Da
IEP (calculated)
6.279
GRAVY (calculated)
0.012
Length
651 amino acids
Sequence
(BLAST)
001: MAFSSSCSSV KAVNSRWTSP SPSPSSRFAV LPAFLHRRYA TSVKLTAISA ALKTVEQTTL TEDNRFSTVG SDSDEYNPTL PKPRILVTEK LGEAGVNLLR
101: EFGDVDCSYD LSPEDLKKKV AESDALIVRS GTKVTREVFE AAKGRLKVVG RAGVGIDNVD LQAATEHGCL VVNAPTANTV AAAEHGIALL ASMARNVAQA
201: DASIKAGTLN YLFLVLLLRW NCRQSKHQYT IETETEKRSK YVGVSLVGKT LAVMGFGKVG TEVARRAKGL GMTVISHDPY APADRARALG VDLVSFDQAI
301: STADFVSLHM PLTPATKKVF NDETFSKMKK GVRLINVARG GVIDEDALVR ALDAGIVAQA ALDVFCEEPP SKDSRLIQHE NVTVTPHLGA STKEAQEGVA
401: IEIAEAVAGA LKGELSATAV NAPMVAPEVL SELTPYIVLA EKLGRLAVQL ASGGKGVQSI RVVYRSARDR DDLDTRLLRA MITKGIIEPI SDSYVNLVNA
501: DFIAKQKGLR ISEERMVVDS SPEYPVDSIQ VQILNVESNF AGAVSDAGDI SIEGKVKYGV PHLTCVGSFG VDVSLEGNLI LCRQVDQPGM IGQVGNILGE
601: QNVNVNFMSV GRTVLRKQAI MAIGVDEEPD NKTLERIGGV SAIEEFVFLK L
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.