Factsheet for AT5G14780.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008737.1-P	Field mustard	mitochondrion	91.93	91.93
CDY09885	Canola	mitochondrion	91.67	91.91
CDX69558	Canola	mitochondrion	91.67	91.67
CDX85582	Canola	mitochondrion	90.1	90.34
Bra023487.1-P	Field mustard	mitochondrion	89.84	89.84
CDX91020	Canola	mitochondrion	89.32	89.32
Zm00001d011368_P001	Maize	cytosol	62.5	83.05
Zm00001d011367_P001	Maize	cytosol	62.5	83.05
Solyc02g086880.2.1	Tomato	plastid	82.03	82.68
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	60.68	82.62
VIT_14s0066g01320.t01	Wine grape	mitochondrion	82.03	82.25
TraesCS7D01G232300.1	Wheat	mitochondrion	79.95	81.43
TraesCS7B01G130600.1	Wheat	mitochondrion	79.95	81.43
TraesCS7A01G232200.1	Wheat	golgi	79.95	81.43
GSMUA_Achr3P01200_001	Banana	mitochondrion	80.99	81.2
Zm00001d045965_P001	Maize	mitochondrion	79.43	81.12
EER89775	Sorghum	mitochondrion	79.43	81.12
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	79.43	80.9
Os06t0486800-01	Rice	mitochondrion	78.12	79.79
KRG93315	Soybean	mitochondrion	76.56	78.4
Zm00001d053924_P001	Maize	cytosol	47.92	77.97
TraesCS4B01G066400.1	Wheat	mitochondrion	71.88	77.75
TraesCS4D01G007200.1	Wheat	golgi	75.78	77.6
TraesCS6D01G255200.2	Wheat	mitochondrion	75.52	76.92
KRG93317	Soybean	nucleus	77.86	76.86
TraesCS6B01G302400.2	Wheat	mitochondrion	75.26	76.66
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	77.34	76.55
Os06t0486900-01	Rice	mitochondrion	75.0	76.19
EES07384	Sorghum	mitochondrion	74.74	74.74
Zm00001d014163_P001	Maize	mitochondrion	46.35	73.55
Zm00001d017801_P001	Maize	mitochondrion	28.91	64.53
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	60.42	63.22
TraesCS6A01G274900.1	Wheat	mitochondrion	60.42	61.54
PGSC0003DMT400068907	Potato	cytosol	23.96	60.93
Zm00001d033618_P001	Maize	cytosol	59.11	58.96
Zm00001d004323_P001	Maize	mitochondrion	22.14	58.62
Zm00001d019818_P001	Maize	mitochondrion	21.88	57.93
AT2G45630.2	Thale cress	plastid	21.88	24.85
AT1G72190.1	Thale cress	mitochondrion	21.88	22.52
AT1G79870.1	Thale cress	cytosol	18.23	22.36
AT1G12550.1	Thale cress	cytosol	18.75	22.29
AT1G68010.2	Thale cress	cytosol	19.01	18.86
AT4G34200.1	Thale cress	plastid	22.4	14.26
AT3G19480.1	Thale cress	plastid	20.31	13.27
AT1G17745.2	Thale cress	plastid	22.14	13.06

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	PDB:3JTM	PDB:3N7U	PDB:3NAQ
MapMan:50.1.16	EntrezGene:831330	UniProt:A0A178UHK7	EMBL:AB023897	ProteinID:AED92076.1	EMBL:AF208028
EMBL:AF208029	EMBL:AF217195	ArrayExpress:AT5G14780	EnsemblPlantsGene:AT5G14780	RefSeq:AT5G14780	TAIR:AT5G14780
RefSeq:AT5G14780-TAIR-G	EnsemblPlants:AT5G14780.1	TAIR:AT5G14780.1	EMBL:AY039609	EMBL:AY054285	EMBL:AY081734
ProteinID:CAC01877.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	Symbol:FDH
InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152
GO:GO:0008863	GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0042183	GO:GO:0046686	GO:GO:0051287	GO:GO:0055114
HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_196982.1	ProteinID:OAO92684.1	PFAM:PF00389	PFAM:PF02826
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00065	ScanProsite:PS00670
ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	UniProt:Q9S7E4	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI0000048B36	SEG:seg	:	:	:	:

Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]

Coordinates

chr5:+:4776733..4779526

Molecular Weight (calculated)

42412.0 Da

IEP (calculated)

7.586

GRAVY (calculated)

-0.299

Length

384 amino acids

Sequence
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.