Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G255200.2 | Wheat | mitochondrion | 77.72 | 77.72 |
| TraesCS6B01G302400.2 | Wheat | mitochondrion | 76.92 | 76.92 |
| EES07384 | Sorghum | mitochondrion | 70.82 | 69.53 |
| TraesCS7A01G232200.1 | Wheat | golgi | 64.99 | 64.99 |
| VIT_14s0066g01320.t01 | Wine grape | mitochondrion | 65.52 | 64.49 |
| Os06t0486900-01 | Rice | mitochondrion | 64.46 | 64.29 |
| GSMUA_Achr3P01200_001 | Banana | mitochondrion | 64.46 | 63.45 |
| KRG93315 | Soybean | mitochondrion | 62.33 | 62.67 |
| Solyc02g086880.2.1 | Tomato | plastid | 62.33 | 61.68 |
| PGSC0003DMT400001303 | Potato | mitochondrion | 62.33 | 61.68 |
| CDY09885 | Canola | mitochondrion | 62.07 | 61.1 |
| CDX69558 | Canola | mitochondrion | 62.07 | 60.94 |
| Bra008737.1-P | Field mustard | mitochondrion | 61.8 | 60.68 |
| AT5G14780.1 | Thale cress | mitochondrion | 61.54 | 60.42 |
| CDX85582 | Canola | mitochondrion | 61.01 | 60.05 |
| KRG93317 | Soybean | nucleus | 61.54 | 59.64 |
| Bra023487.1-P | Field mustard | mitochondrion | 60.74 | 59.64 |
| KRH20294 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 61.27 | 59.54 |
| CDX91020 | Canola | mitochondrion | 59.95 | 58.85 |
| TraesCS5D01G389600.1 | Wheat | extracellular, mitochondrion | 55.44 | 56.95 |
| TraesCS2A01G034900.1 | Wheat | mitochondrion | 16.18 | 18.83 |
| TraesCS2A01G035500.1 | Wheat | extracellular, mitochondrion | 16.45 | 18.56 |
| TraesCS2A01G035000.2 | Wheat | mitochondrion, plastid | 17.51 | 18.23 |
| TraesCS7A01G538500.1 | Wheat | cytosol | 16.45 | 18.02 |
| TraesCS2A01G034800.1 | Wheat | cytosol, plasma membrane, plastid | 14.85 | 17.72 |
| TraesCS2A01G035400.1 | Wheat | mitochondrion | 15.38 | 17.58 |
| TraesCS2A01G028600.1 | Wheat | extracellular, plasma membrane | 15.38 | 17.31 |
| TraesCS5A01G496700.1 | Wheat | cytosol, peroxisome, plastid | 14.32 | 17.09 |
| TraesCS3A01G153500.1 | Wheat | peroxisome | 14.06 | 16.67 |
| TraesCS5A01G161300.1 | Wheat | plastid | 15.12 | 15.08 |
| TraesCS6A01G000400.1 | Wheat | peroxisome | 13.53 | 13.21 |
| TraesCS7A01G496500.1 | Wheat | plastid | 18.3 | 11.27 |
| TraesCS3A01G146800.1 | Wheat | plastid | 18.3 | 11.13 |
| TraesCS2A01G508900.1 | Wheat | plastid | 17.77 | 10.88 |
| TraesCS1A01G221000.1 | Wheat | plastid | 15.38 | 9.95 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_CS | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 |
| GO:GO:0051287 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00389 | PFAM:PF02826 | ScanProsite:PS00671 |
| PANTHER:PTHR42938 | PANTHER:PTHR42938:SF1 | SUPFAM:SSF51735 | SUPFAM:SSF52283 | EnsemblPlantsGene:TraesCS6A01G274900 | EnsemblPlants:TraesCS6A01G274900.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:501791776..501793420
Molecular Weight (calculated)
40564.1 Da
IEP (calculated)
9.611
GRAVY (calculated)
-0.419
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMKNATQQV VRALESSLTR SLHASPGSKK IVGVFYKGGE YAGQNPNFVG CVENALGIRS WLESQGHQYI VTDDKDGPNC ELEKHIADAH VLITTPFHPA
101: YVSADRIRRG KNLELLLTAG IGSDHIELPA AAAAGLTVAE VTGSNTVSVA EDQLMRILVL MRNFLPGHHQ AISGEWTSPA SRTGPTTWRA RRWAPSAPAA
201: SGSCCSSASS PSAATCSTTT GSASTPRSRR SSAPPSRRTS TPCCPSATSS CSTCRSPRRQ RGMFNKEKIA KMKKGVIIVN NARGAIMDTQ AVADACKSGH
301: IAGYGGDVWY PQPAPKEHPW RYMPNNAMTP HISGTTIDGQ LRYAAGLKDM LERYFKGQDF PEPNYIVKEG KLASQYQ
101: YVSADRIRRG KNLELLLTAG IGSDHIELPA AAAAGLTVAE VTGSNTVSVA EDQLMRILVL MRNFLPGHHQ AISGEWTSPA SRTGPTTWRA RRWAPSAPAA
201: SGSCCSSASS PSAATCSTTT GSASTPRSRR SSAPPSRRTS TPCCPSATSS CSTCRSPRRQ RGMFNKEKIA KMKKGVIIVN NARGAIMDTQ AVADACKSGH
301: IAGYGGDVWY PQPAPKEHPW RYMPNNAMTP HISGTTIDGQ LRYAAGLKDM LERYFKGQDF PEPNYIVKEG KLASQYQ
001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR
Arabidopsis Description
FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.