Factsheet for TraesCS7A01G538500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G456600.1	Wheat	cytosol, plastid	95.06	95.06
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	72.38	74.55
TraesCS2A01G035400.1	Wheat	mitochondrion	70.35	73.33
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	69.19	72.34
TraesCS2A01G034900.1	Wheat	mitochondrion	64.24	68.21
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	63.37	60.22
GSMUA_Achr5P14430_001	Banana	mitochondrion	52.33	59.21
GSMUA_Achr5P14420_001	Banana	cytosol	56.4	58.79
GSMUA_Achr4P17980_001	Banana	cytosol	18.02	57.94
Solyc08g080030.2.1	Tomato	cytosol	42.44	54.07
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	48.84	53.16
PGSC0003DMT400058518	Potato	cytosol	21.22	52.52
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	50.29	51.64
CDY57070	Canola	cytosol	48.26	51.55
CDY54697	Canola	mitochondrion	22.09	51.35
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	42.73	50.69
Bra026966.1-P	Field mustard	cytosol	35.17	50.63
CDY26572	Canola	cytosol	35.47	50.62
CDY17092	Canola	cytosol	15.41	50.0
AT2G45630.2	Thale cress	plastid	48.84	49.7
Bra019774.1-P	Field mustard	cytosol	48.84	48.7
CDX98054	Canola	cytosol	48.84	48.7
CDY16011	Canola	cytosol, peroxisome, plastid	41.57	48.31
PGSC0003DMT400058520	Potato	cytosol	45.64	48.31
TraesCS3A01G153500.1	Wheat	peroxisome	44.48	48.11
KRH48312	Soybean	cytosol	47.09	48.07
Bra035498.1-P	Field mustard	cytosol	13.66	47.96
VIT_02s0025g04730.t01	Wine grape	cytosol	44.19	47.95
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	43.6	47.47
Solyc01g093990.2.1	Tomato	cytosol	43.31	46.13
CDY26571	Canola	plastid	38.95	45.27
KRH48313	Soybean	cytosol	44.19	45.24
KRH48311	Soybean	cytosol	42.73	44.01
CDY16012	Canola	cytosol, nucleus, peroxisome	30.81	43.98
KRH65202	Soybean	cytosol	27.91	42.67
KRH48310	Soybean	cytosol	40.99	42.22
KRH65201	Soybean	plastid	32.85	39.37
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.87	37.96
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	38.66	33.5
CDY16010	Canola	cytosol, nucleus, plastid	48.26	30.13
CDY26570	Canola	cytosol	35.17	26.89
TraesCS6A01G000400.1	Wheat	peroxisome	23.55	20.98
TraesCS7A01G232200.1	Wheat	golgi	22.38	20.42
TraesCS5A01G161300.1	Wheat	plastid	22.38	20.37
TraesCS6A01G274900.1	Wheat	mitochondrion	18.02	16.45
TraesCS7A01G496500.1	Wheat	plastid	28.49	16.01
TraesCS2A01G508900.1	Wheat	plastid	28.2	15.75
TraesCS3A01G146800.1	Wheat	plastid	26.45	14.68
TraesCS1A01G221000.1	Wheat	plastid	21.8	12.86

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF207
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS7A01G538500	EnsemblPlants:TraesCS7A01G538500.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr7A:+:715688852..715689886

Molecular Weight (calculated)

36371.0 Da

IEP (calculated)

8.488

GRAVY (calculated)

0.138

Length

344 amino acids

Sequence
(BLAST)

001: MDGFSSPAMA PTVRKPAAHP AVLVLRRLDA PFAAALHEHF LLLDFHASGE PLPAFLAAAA AAPEPPRAVL VVGGGAIRVD APFLDVVQSV RCVVTTGTGV
101: DHIDLAECAR RGVAVANAGK VYSTDVADHA VGLLLDVQRR VSAAERYVRR GSWPAQGDYR PLGSKLGGKR VGIIGLGNIG SLVARRLEAF GCVILYNSRR
201: RKEEGSSRRY TYFPDVRGLA AASDVLVVAC ALNEETRHVV GRKVLDALGK DGVLINVGRG ANVDEAALVA ALKEGRIAGA GLDVFEDEPK VPAELLPMDN
301: VVLTPHVAVL TQESRSDLRA QTIGNLQAFF SGQPLLTPVP CHRA

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.