Factsheet for Solyc08g080030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058520	Potato	cytosol	90.74	75.38
GSMUA_Achr4P17980_001	Banana	cytosol	22.96	57.94
HORVU2Hr1G005210.2	Barley	mitochondrion	53.7	52.35
HORVU4Hr1G086940.2	Barley	cytosol	23.7	49.61
GSMUA_Achr5P14420_001	Banana	cytosol	60.0	49.09
TraesCS2A01G035400.1	Wheat	mitochondrion	57.04	46.67
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	57.41	46.41
Solyc01g093990.2.1	Tomato	cytosol	55.19	46.13
GSMUA_Achr5P14430_001	Banana	mitochondrion	51.85	46.05
OQU81058	Sorghum	cytosol	56.67	45.67
Os04t0107500-01	Rice	plasma membrane	53.33	45.57
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	56.3	45.51
TraesCS2D01G034600.1	Wheat	mitochondrion	55.56	45.45
Zm00001d018790_P001	Maize	extracellular, plasma membrane	52.59	45.37
TraesCS2B01G048500.1	Wheat	cytosol	56.3	45.1
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	52.96	44.83
Zm00001d024907_P001	Maize	mitochondrion	55.93	44.81
OQU81061	Sorghum	plastid	52.59	44.51
Zm00001d024906_P001	Maize	cytosol	54.07	44.38
OQU88433	Sorghum	cytosol	52.59	44.24
TraesCS2A01G034900.1	Wheat	mitochondrion	52.96	44.14
TraesCS2D01G030900.1	Wheat	cytosol	51.48	43.99
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	51.48	43.99
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	55.56	43.73
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	51.11	43.67
EES11740	Sorghum	mitochondrion	53.33	43.64
TraesCS2B01G048000.1	Wheat	mitochondrion	51.85	43.21
TraesCS2D01G034100.1	Wheat	mitochondrion	51.48	42.9
Os04t0107200-01	Rice	mitochondrion	52.22	42.86
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	52.22	42.86
Solyc12g044250.1.1	Tomato	vacuole	50.0	42.86
EES10352	Sorghum	cytosol, mitochondrion	53.33	42.6
TraesCS7A01G538500.1	Wheat	cytosol	54.07	42.44
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	55.93	42.3
EES10400	Sorghum	cytosol	52.59	42.01
TraesCS7B01G456600.1	Wheat	cytosol, plastid	53.33	41.86
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	48.52	41.85
Zm00001d008883_P001	Maize	mitochondrion	51.11	41.82
TraesCS2B01G048100.1	Wheat	plastid	52.96	41.57
Zm00001d004451_P001	Maize	cytosol	51.48	41.25
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	51.11	41.19
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	49.26	41.18
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	49.26	41.18
Solyc03g120680.2.1	Tomato	nucleus	47.41	41.16
EES11738	Sorghum	cytosol	51.48	41.12
Os04t0107300-01	Rice	mitochondrion, plasma membrane	49.26	40.8
Solyc12g044260.1.1	Tomato	cytosol	46.3	39.94
Os11t0229100-01	Rice	extracellular	20.37	39.57
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	52.22	38.95
TraesCS2D01G034300.1	Wheat	plastid	51.48	38.4
HORVU2Hr1G005150.2	Barley	plastid	41.85	31.65
Solyc03g120660.2.1	Tomato	cytosol	14.81	25.32
Solyc11g020060.1.1	Tomato	cytosol	23.7	22.78
Solyc03g044670.1.1	Tomato	cytosol	17.04	19.17
Solyc01g111630.2.1	Tomato	nucleus, plastid	27.04	18.91
Solyc02g086880.2.1	Tomato	plastid	21.85	15.49
Solyc03g112070.2.1	Tomato	plastid	26.67	12.0
Solyc10g049890.1.1	Tomato	plastid	25.93	11.76
Solyc03g123830.2.1	Tomato	plastid	25.19	10.85

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618
GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	UniProt:K4CP03	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:Solyc08g080030.2
EnsemblPlants:Solyc08g080030.2.1	UniParc:UPI000276B6F8	:	:	:	:

Description

No Description!

Coordinates

chr8:+:63381852..63383724

Molecular Weight (calculated)

29396.4 Da

IEP (calculated)

7.535

GRAVY (calculated)

-0.030

Length

270 amino acids

Sequence
(BLAST)

001: MASADQHQSP GTTNIRQVLV HRYPRFGNSA GYDHFDLAEC RRRGIRVTGA GDSFSEDAAD FAVGLLIDVL RRVSVANRFV CAGSWPVKGE FPLGSKVGGK
101: RVGIVGLGSI GSRVGKRLEA FGCSIAYTSK RMKPNVSFPF HSNIHDLAIN SDVLILCCAL TKETHRIVGK EVLTALGKEG IVINVGRGAL IDEKELVQFL
201: KRGEIGGAGL DVYENEPHVP EELFGLDNVV LSPHVAVLTP ESFKALEELF TYNLEAFFSN KPLRAQIQCE

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.