CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024907_P001	Maize	mitochondrion	87.16	86.65
EES11738	Sorghum	cytosol	72.84	72.19
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	69.85	71.12
EES10352	Sorghum	cytosol, mitochondrion	71.04	70.41
EES10400	Sorghum	cytosol	68.36	67.75
EES11740	Sorghum	mitochondrion	61.79	62.73
GSMUA_Achr4P17980_001	Banana	cytosol	19.1	59.81
Solyc08g080030.2.1	Tomato	cytosol	45.67	56.67
GSMUA_Achr5P14430_001	Banana	mitochondrion	51.04	56.25
PGSC0003DMT400058518	Potato	cytosol	23.28	56.12
GSMUA_Achr5P14420_001	Banana	cytosol	54.93	55.76
CDY54697	Canola	mitochondrion	23.88	54.05
CDY17092	Canola	cytosol	16.42	51.89
PGSC0003DMT400058520	Potato	cytosol	49.55	51.08
Bra035498.1-P	Field mustard	cytosol	14.63	50.0
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	42.99	49.66
OQU88433	Sorghum	cytosol	46.87	48.91
OQU81061	Sorghum	plastid	46.57	48.9
VIT_02s0025g04730.t01	Wine grape	cytosol	45.97	48.58
Bra026966.1-P	Field mustard	cytosol	34.63	48.54
CDY57070	Canola	cytosol	46.27	48.14
CDY26572	Canola	cytosol	34.63	48.13
KRH48312	Soybean	cytosol	47.76	47.48
KXG31500	Sorghum	cytosol	44.48	47.3
CDY16011	Canola	cytosol, peroxisome, plastid	41.19	46.62
AT2G45630.2	Thale cress	plastid	46.87	46.45
Bra019774.1-P	Field mustard	cytosol	47.16	45.8
CDX98054	Canola	cytosol	47.16	45.8
Solyc01g093990.2.1	Tomato	cytosol	43.58	45.2
KRH48313	Soybean	cytosol	44.48	44.35
KRH48311	Soybean	cytosol	43.88	44.01
CDY26571	Canola	plastid	38.51	43.58
CDY16012	Canola	cytosol, nucleus, peroxisome	30.15	41.91
KRH65202	Soybean	cytosol	28.06	41.78
KRH48310	Soybean	cytosol	41.19	41.32
KRH65201	Soybean	plastid	33.13	38.68
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.75	36.88
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	37.31	31.49
CDY16010	Canola	cytosol, nucleus, plastid	48.36	29.4
CDY26570	Canola	cytosol	34.93	26.0
KXG29243	Sorghum	cytosol	25.97	22.83
EER89775	Sorghum	mitochondrion	22.99	20.48
KXG34859	Sorghum	mitochondrion, plastid	22.99	20.05
EES07384	Sorghum	mitochondrion	22.99	20.05
EER96197	Sorghum	mitochondrion	22.99	20.0
EES15079	Sorghum	plastid	25.97	14.05
EER90146	Sorghum	mitochondrion, plastid	24.78	13.54
EES12983	Sorghum	plastid	24.48	13.23

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EntrezGene:8057338	UniProt:C5YBK7	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd
ProteinID:EES10351.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016616	GO:GO:0016618	GO:GO:0030267	GO:GO:0051287	GO:GO:0055114
InterPro:NAD(P)-bd_dom_sf	ProteinID:OQU81057.1	EnsemblPlants:OQU81058	ProteinID:OQU81058	ProteinID:OQU81058.1	PFAM:PF00389
PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	EnsemblPlantsGene:SORBI_3006G004600	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI0001A86BF3	RefSeq:XP_002446023.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:784754..787700

Molecular Weight (calculated)

35616.1 Da

IEP (calculated)

6.861

GRAVY (calculated)

0.177

Length

335 amino acids

Sequence
(BLAST)

001: MAGGGGEQRV DPVPAVLFIR RPGAPFCDAM HQRFRVLELA TRASTEQAAA FLAAAAAEPD PPRAAVVMGG RSVRADAAFL DAVPSVRCLL STAAGVDHID
101: LAECARRGVA VANSGTVYSA DVADHAVGML VDVLRRVSAA ERFVRRRLWP LQEGGYPLGS KLGGKRVGII GLGNIGSLIA KRLEAFGCVI YYNSRRPKDS
201: VSYRYFPNVH DLASESDILV VACALNKETR HIVDKDVLEA LGKDGIVINI GRGANIDEAA LVSALKDGRI AGAGLDVFEN EPKVPVELLS MDNVVLTPHS
301: AVFTAESRSD LCEHLICNLE AFFAGKPLIT PVLLP

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.