Factsheet for Bra035498.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P17980_001	Banana	cytosol	55.1	50.47
PGSC0003DMT400058518	Potato	cytosol	54.08	38.13
HORVU4Hr1G086940.2	Barley	cytosol	46.94	35.66
KRH65202	Soybean	cytosol	58.16	25.33
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	84.69	20.91
Bra019774.1-P	Field mustard	cytosol	71.43	20.29
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	57.14	19.31
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	59.18	18.35
GSMUA_Achr5P14420_001	Banana	cytosol	61.22	18.18
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	59.18	18.18
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	58.16	18.04
Os04t0107500-01	Rice	plasma membrane	57.14	17.72
HORVU2Hr1G005210.2	Barley	mitochondrion	50.0	17.69
TraesCS2D01G030900.1	Wheat	cytosol	56.12	17.41
Zm00001d018790_P001	Maize	extracellular, plasma membrane	55.1	17.25
OQU81061	Sorghum	plastid	56.12	17.24
OQU88433	Sorghum	cytosol	56.12	17.13
GSMUA_Achr5P14430_001	Banana	mitochondrion	53.06	17.11
PGSC0003DMT400058520	Potato	cytosol	56.12	16.92
KRH65201	Soybean	plastid	48.98	16.72
VIT_02s0025g04730.t01	Wine grape	cytosol	54.08	16.72
KRH48312	Soybean	cytosol	57.14	16.62
Bra003537.1-P	Field mustard	cytosol	52.04	16.29
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	55.1	16.12
KRH48313	Soybean	cytosol	55.1	16.07
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	58.16	15.97
KRH48310	Soybean	cytosol	52.04	15.27
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	51.02	14.97
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	51.02	14.97
KRH48311	Soybean	cytosol	51.02	14.97
TraesCS2A01G035400.1	Wheat	mitochondrion	50.0	14.85
TraesCS2D01G034600.1	Wheat	mitochondrion	50.0	14.85
Bra035206.1-P	Field mustard	cytosol	46.94	14.84
OQU81058	Sorghum	cytosol	50.0	14.63
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	51.02	14.58
Os04t0107200-01	Rice	mitochondrion	47.96	14.29
TraesCS2B01G048500.1	Wheat	cytosol	48.98	14.24
Zm00001d024906_P001	Maize	cytosol	46.94	13.98
Zm00001d008883_P001	Maize	mitochondrion	46.94	13.94
EES11740	Sorghum	mitochondrion	46.94	13.94
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	45.92	13.93
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	45.92	13.93
EES10352	Sorghum	cytosol, mitochondrion	47.96	13.91
TraesCS2B01G048000.1	Wheat	mitochondrion	45.92	13.89
TraesCS7A01G538500.1	Wheat	cytosol	47.96	13.66
TraesCS2A01G034900.1	Wheat	mitochondrion	44.9	13.58
TraesCS2D01G034100.1	Wheat	mitochondrion	44.9	13.58
Os04t0107300-01	Rice	mitochondrion, plasma membrane	43.88	13.19
TraesCS7B01G456600.1	Wheat	cytosol, plastid	45.92	13.08
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	43.88	13.07
Zm00001d004451_P001	Maize	cytosol	44.9	13.06
Zm00001d024907_P001	Maize	mitochondrion	44.9	13.06
EES11738	Sorghum	cytosol	44.9	13.02
EES10400	Sorghum	cytosol	44.9	13.02
TraesCS2B01G048100.1	Wheat	plastid	44.9	12.79
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	57.14	12.15
HORVU2Hr1G005150.2	Barley	plastid	42.86	11.76
TraesCS2D01G034300.1	Wheat	plastid	41.84	11.33
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	40.82	11.05
Bra026966.1-P	Field mustard	cytosol	23.47	9.62
Bra004055.1-P	Field mustard	cytosol	28.57	7.25
Bra004275.1-P	Field mustard	cytosol	28.57	7.25
Bra003888.1-P	Field mustard	mitochondrion	21.43	5.65
Bra023487.1-P	Field mustard	mitochondrion	19.39	4.95
Bra008737.1-P	Field mustard	mitochondrion	19.39	4.95
Bra016589.1-P	Field mustard	plastid	29.59	4.67
Bra017637.1-P	Field mustard	plastid	26.53	4.35
Bra034616.1-P	Field mustard	plastid	26.53	4.33
Bra011506.1-P	Field mustard	plastid	26.53	4.19
Bra001747.1-P	Field mustard	plastid	24.49	4.09
Bra034615.1-P	Field mustard	cytosol	4.08	2.34
Solyc03g120660.2.1	Tomato	cytosol	0.0	0.0
Os11t0229100-01	Rice	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Bra035498.1	EnsemblPlants:Bra035498.1-P	EnsemblPlantsGene:Bra035498	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	PFAM:PF02826	SUPFAM:SSF51735	UniParc:UPI00025461A0
UniProt:M4F348	MapMan:35.1	:	:	:	:

Description

AT1G12550 (E=1e-036) | oxidoreductase family protein

Coordinates

chrA08:-:7843497..7843793

Molecular Weight (calculated)

10494.0 Da

IEP (calculated)

4.537

GRAVY (calculated)

0.408

Length

98 amino acids

Sequence
(BLAST)

1: MKALGRKGIT INVGRGGLID EMEMVKCLVD SVIGGAGLDV FEKEPGVPEE LFGLDNVVLS LHAAMVMPGS LDNIVHLYLA NVKAFFSDQP LISPVRLD

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.