Factsheet for TraesCS2B01G047900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	95.57	95.57
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	79.43	78.68
Zm00001d018790_P001	Maize	extracellular, plasma membrane	73.42	74.12
OQU81061	Sorghum	plastid	72.15	71.47
OQU88433	Sorghum	cytosol	72.47	71.34
Os04t0107500-01	Rice	plasma membrane	70.25	70.25
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	77.53	68.63
GSMUA_Achr4P17980_001	Banana	cytosol	19.94	58.88
Bra035498.1-P	Field mustard	cytosol	18.04	58.16
PGSC0003DMT400058518	Potato	cytosol	25.32	57.55
CDY17092	Canola	cytosol	19.3	57.55
CDY54697	Canola	mitochondrion	26.9	57.43
TraesCS2B01G048000.1	Wheat	mitochondrion	54.75	53.4
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	47.47	51.72
GSMUA_Achr5P14420_001	Banana	cytosol	53.8	51.52
Solyc08g080030.2.1	Tomato	cytosol	43.67	51.11
CDY57070	Canola	cytosol	51.9	50.93
Bra026966.1-P	Field mustard	cytosol	38.29	50.63
GSMUA_Achr5P14430_001	Banana	mitochondrion	48.42	50.33
CDY26572	Canola	cytosol	38.29	50.21
TraesCS7B01G456600.1	Wheat	cytosol, plastid	54.43	50.0
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	50.95	49.85
TraesCS4B01G324200.1	Wheat	peroxisome	49.68	49.68
TraesCS2B01G048500.1	Wheat	cytosol	52.85	49.55
CDX98054	Canola	cytosol	53.16	48.7
Bra019774.1-P	Field mustard	cytosol	53.16	48.7
TraesCS2B01G048100.1	Wheat	plastid	52.85	48.55
CDY16011	Canola	cytosol, peroxisome, plastid	44.94	47.97
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	47.78	47.78
PGSC0003DMT400058520	Potato	cytosol	48.73	47.38
VIT_02s0025g04730.t01	Wine grape	cytosol	47.15	47.0
KRH48312	Soybean	cytosol	47.78	44.81
KRH48313	Soybean	cytosol	47.15	44.35
KRH48311	Soybean	cytosol	46.52	44.01
AT2G45630.2	Thale cress	plastid	46.52	43.49
CDY16012	Canola	cytosol, nucleus, peroxisome	32.59	42.74
CDY26571	Canola	plastid	39.56	42.23
Solyc01g093990.2.1	Tomato	cytosol	43.04	42.11
KRH65202	Soybean	cytosol	29.75	41.78
KRH48310	Soybean	cytosol	43.35	41.02
KRH65201	Soybean	plastid	36.08	39.72
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	43.35	34.51
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.0	34.27
CDY16010	Canola	cytosol, nucleus, plastid	51.27	29.4
TraesCS5B01G226200.1	Wheat	cytosol	11.71	27.41
CDY26570	Canola	cytosol	34.49	24.22
TraesCS6B01G004400.1	Wheat	peroxisome	27.85	22.8
TraesCS7B01G373500.1	Wheat	cytosol	6.65	20.19
TraesCS4B01G066400.1	Wheat	mitochondrion	22.15	19.72
TraesCS6B01G302400.2	Wheat	mitochondrion	23.1	19.36
TraesCS7B01G130600.1	Wheat	mitochondrion	23.1	19.36
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	21.52	17.99
TraesCS7B01G400800.1	Wheat	plastid	30.7	15.88
TraesCS1B01G234300.2	Wheat	plastid	28.8	14.7

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF147
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2B01G047900	EnsemblPlants:TraesCS2B01G047900.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr2B:-:23715625..23717281

Molecular Weight (calculated)

32842.6 Da

IEP (calculated)

4.908

GRAVY (calculated)

0.340

Length

316 amino acids

Sequence
(BLAST)

001: MEDTTPPADE RPLVLLGQPL FPEFAAALAA RFRFVLVADA DAATLAQGRA LLIGLNPVTD DHLAALPALG LVAGISVGIN HVDLAACRRR GIAVTNAGAA
101: FAVDTADYGV GLVVAVLRRL AAADAHVRAG RWAADGDYPL TTKVSGKRVG VVGLGNIGSR IARRLAAFGC AVSYNSRSPK PSAAYEFVPT VRDLAAASDV
201: LVLSCALTEE TRHVVNREVM EALGKDGVLV NVGRGGLVDE PELVRCLQEG VIGGAGLDVF ESEPDVPPEL FSMDNVVLSA HRAVATPESI RGTIELVAGN
301: LDAFFAGKPL LSPVEL

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.