CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17092	Canola	cytosol	52.7	73.58
GSMUA_Achr4P17980_001	Banana	cytosol	35.14	48.6
PGSC0003DMT400058518	Potato	cytosol	41.89	44.6
HORVU4Hr1G086940.2	Barley	cytosol	33.11	37.98
AT1G12550.1	Thale cress	cytosol	75.68	34.67
CDY16011	Canola	cytosol, peroxisome, plastid	68.92	34.46
CDY26572	Canola	cytosol	56.08	34.44
CDY57070	Canola	cytosol	73.65	33.85
CDX98054	Canola	cytosol	75.0	32.17
KRH65202	Soybean	cytosol	45.95	30.22
HORVU2Hr1G005210.2	Barley	mitochondrion	54.73	29.24
CDY26571	Canola	plastid	57.43	28.72
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	58.78	27.53
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	72.97	27.2
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	58.11	26.96
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	57.43	26.9
GSMUA_Achr5P14420_001	Banana	cytosol	59.46	26.67
Os04t0107500-01	Rice	plasma membrane	56.76	26.58
TraesCS2D01G030900.1	Wheat	cytosol	56.08	26.27
OQU81061	Sorghum	plastid	55.41	25.71
OQU88433	Sorghum	cytosol	55.41	25.55
KRH48312	Soybean	cytosol	58.11	25.52
Os04t0107200-01	Rice	mitochondrion	56.08	25.23
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	56.76	25.07
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	48.65	24.83
KRH48313	Soybean	cytosol	56.08	24.7
CDX67931	Canola	cytosol	52.03	24.6
Zm00001d018790_P001	Maize	extracellular, plasma membrane	52.03	24.6
CDX79406	Canola	cytosol	52.03	24.6
CDY16012	Canola	cytosol, nucleus, peroxisome	39.86	24.48
TraesCS2D01G034600.1	Wheat	mitochondrion	54.05	24.24
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	54.05	23.95
TraesCS2A01G035400.1	Wheat	mitochondrion	53.38	23.94
OQU81058	Sorghum	cytosol	54.05	23.88
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	57.43	23.81
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	52.7	23.71
VIT_02s0025g04730.t01	Wine grape	cytosol	50.68	23.66
KRH48311	Soybean	cytosol	53.38	23.65
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	53.38	23.65
PGSC0003DMT400058520	Potato	cytosol	51.35	23.38
GSMUA_Achr5P14430_001	Banana	mitochondrion	47.97	23.36
EES11740	Sorghum	mitochondrion	52.03	23.33
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	54.05	23.32
CDX87280	Canola	cytosol	48.65	23.23
KRH48310	Soybean	cytosol	52.03	23.05
CDY58781	Canola	cytosol	48.65	23.0
TraesCS2B01G048500.1	Wheat	cytosol	51.35	22.55
TraesCS2B01G048100.1	Wheat	plastid	52.03	22.38
KRH65201	Soybean	plastid	43.24	22.3
EES10400	Sorghum	cytosol	50.68	22.19
Zm00001d024906_P001	Maize	cytosol	49.32	22.19
CDY16010	Canola	cytosol, nucleus, plastid	82.43	22.14
Zm00001d008883_P001	Maize	mitochondrion	49.32	22.12
TraesCS7A01G538500.1	Wheat	cytosol	51.35	22.09
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	47.97	21.98
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	47.97	21.98
Zm00001d024907_P001	Maize	mitochondrion	50.0	21.96
EES11738	Sorghum	cytosol	50.0	21.89
EES10352	Sorghum	cytosol, mitochondrion	50.0	21.89
TraesCS7B01G456600.1	Wheat	cytosol, plastid	50.68	21.8
Zm00001d004451_P001	Maize	cytosol	49.32	21.66
TraesCS2A01G034900.1	Wheat	mitochondrion	46.62	21.3
TraesCS2B01G048000.1	Wheat	mitochondrion	46.62	21.3
TraesCS2D01G034100.1	Wheat	mitochondrion	45.95	20.99
Os04t0107300-01	Rice	mitochondrion, plasma membrane	45.27	20.55
HORVU2Hr1G005150.2	Barley	plastid	49.32	20.45
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	50.0	20.44
TraesCS2D01G034300.1	Wheat	plastid	48.65	19.89
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	53.38	17.14
CDY26570	Canola	cytosol	39.86	13.11
CDX85582	Canola	mitochondrion	27.7	10.71
CDX91020	Canola	mitochondrion	27.03	10.42
CDX68275	Canola	mitochondrion	25.68	10.22
CDY09885	Canola	mitochondrion	26.35	10.18
CDX69558	Canola	mitochondrion	26.35	10.16
CDY07405	Canola	cytosol	26.35	10.1
CDY50445	Canola	mitochondrion	25.0	9.92
CDY04198	Canola	cytosol	26.35	9.9
CDY12275	Canola	cytosol	21.62	9.36
CDY57736	Canola	plastid	22.97	8.92
CDX96054	Canola	mitochondrion	26.35	8.52
Os11t0229100-01	Rice	extracellular	7.43	7.91
CDX75409	Canola	plastid	27.03	6.71
CDY49286	Canola	plastid	27.03	6.69
CDX72462	Canola	plastid	27.03	6.69
CDX76268	Canola	plastid	27.03	6.67
CDX69034	Canola	plastid	27.03	6.33
CDX96754	Canola	plastid	26.35	6.28
CDX83893	Canola	plastid	26.35	6.27
CDY22972	Canola	plastid	22.97	5.79
CDX82295	Canola	plastid	22.97	5.79
CDY01876	Canola	endoplasmic reticulum, plasma membrane	26.35	5.63
Solyc03g120660.2.1	Tomato	cytosol	4.05	3.8
CDY57737	Canola	cytosol	2.7	2.34

Protein Annotations

EnsemblPlants:CDY54697	EnsemblPlantsGene:GSBRNA2T00014511001	Gene3D:3.40.50.720	GO:A0A078IZ84	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_NAD-bd
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	PFAM:PF02826	ProteinID:CDY54697	ProteinID:CDY54697.1
SUPFAM:SSF51735	UniParc:UPI0004EE3A47	UniProt:A0A078IZ84	MapMan:35.1	:	:

Description

BnaC01g42320DBnaC01g42320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ84]

Coordinates

chrLK033343:+:31198..31692

Molecular Weight (calculated)

16128.7 Da

IEP (calculated)

5.180

GRAVY (calculated)

0.141

Length

148 amino acids

Sequence
(BLAST)

001: MKSIGSLIAK RLKPFGCIIS CNSTSQKHRI PYRYYPDLLS LAANNDVNVL SCALNDQTHH IVDREVMEAL GKKGIIINVG RGGLIDEMEM VKCLVDGVIG
101: GAGLDVFEKE PGVPEELFGS LDNIAQLALA NLKAFFSDQP LIFPVQLD

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.