CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004055.1-P	Field mustard	cytosol	100.0	100.0
AT1G68010.2	Thale cress	cytosol	97.15	96.9
CDY04198	Canola	cytosol	98.45	96.45
Solyc01g111630.2.1	Tomato	nucleus, plastid	90.93	90.93
PGSC0003DMT400015828	Potato	cytosol	90.41	90.41
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	89.9	89.9
KRG90684	Soybean	nucleus	87.56	87.56
KRH36064	Soybean	nucleus	87.05	87.05
TraesCS6D01G001700.1	Wheat	golgi, plastid	85.75	85.75
TraesCS6B01G004400.1	Wheat	peroxisome	85.75	85.75
TraesCS6A01G000400.1	Wheat	peroxisome	85.49	85.49
Os02t0101500-02	Rice	extracellular, mitochondrion	84.97	84.97
GSMUA_Achr5P18940_001	Banana	cytosol	34.46	84.71
KXG29243	Sorghum	cytosol	82.38	83.46
HORVU6Hr1G017010.1	Barley	cytosol	23.06	83.18
CDX96054	Canola	mitochondrion	98.19	82.75
GSMUA_Achr5P18950_001	Banana	cytosol	47.41	81.33
TraesCS5B01G226200.1	Wheat	cytosol	24.87	71.11
HORVU6Hr1G000640.1	Barley	cytosol	54.15	68.98
HORVU6Hr1G000650.2	Barley	peroxisome	33.42	66.84
Zm00001d014919_P002	Maize	mitochondrion	73.83	65.97
CDY01876	Canola	endoplasmic reticulum, plasma membrane	98.45	54.83
CDX67931	Canola	cytosol	24.09	29.71
CDX79406	Canola	cytosol	24.09	29.71
CDY17092	Canola	cytosol	8.03	29.25
CDX87280	Canola	cytosol	22.54	28.06
CDY58781	Canola	cytosol	22.02	27.16
CDY54697	Canola	mitochondrion	10.1	26.35
CDY57070	Canola	cytosol	21.76	26.09
CDX98054	Canola	cytosol	22.02	24.64
CDY26572	Canola	cytosol	14.77	23.65
CDY16011	Canola	cytosol, peroxisome, plastid	18.13	23.65
CDY57736	Canola	plastid	22.02	22.31
CDY16012	Canola	cytosol, nucleus, peroxisome	12.95	20.75
CDY26571	Canola	plastid	15.8	20.61
CDX68275	Canola	mitochondrion	19.43	20.16
CDY50445	Canola	mitochondrion	19.43	20.11
CDX85582	Canola	mitochondrion	19.17	19.32
CDY09885	Canola	mitochondrion	18.91	19.06
CDX69558	Canola	mitochondrion	18.65	18.75
CDX91020	Canola	mitochondrion	18.39	18.49
CDX82295	Canola	plastid	26.68	17.55
CDY22972	Canola	plastid	26.68	17.55
CDX75409	Canola	plastid	25.39	16.44
CDX83893	Canola	plastid	26.42	16.4
CDX96754	Canola	plastid	26.17	16.26
CDY49286	Canola	plastid	25.13	16.22
CDX72462	Canola	plastid	25.13	16.22
CDX76268	Canola	plastid	24.87	16.0
CDX69034	Canola	plastid	25.39	15.51
CDY16010	Canola	cytosol, nucleus, plastid	21.5	15.06
CDY26570	Canola	cytosol	15.29	13.11
CDY12275	Canola	cytosol	10.88	12.28
CDY57737	Canola	cytosol	2.59	5.85

Protein Annotations

MapMan:1.3.6	Gene3D:3.40.50.720	GO:A0A078EZ90	UniProt:A0A078EZ90	EnsemblPlants:CDY07405	ProteinID:CDY07405
ProteinID:CDY07405.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00124391001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF137	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000254131B
SEG:seg	:	:	:	:	:

Description

BnaA07g24840DBnaA07g24840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EZ90]

Coordinates

chrLK031978:-:476079..478632

Molecular Weight (calculated)

42243.4 Da

IEP (calculated)

7.964

GRAVY (calculated)

-0.011

Length

386 amino acids

Sequence
(BLAST)

001: MAKPMAIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG NKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADGFMRAGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEV ALVDHLRENP MFRVGLDVFE
301: EEPFMKPGLA DMKNAIVVPH IASASKWTRE GMATLAALNV LGRIKGYPIW SDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Best Arabidopsis Sequence Match ( AT1G68010.1 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.