CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008737.1-P	Field mustard	mitochondrion	98.96	98.7
CDX69558	Canola	mitochondrion	98.43	98.18
CDX85582	Canola	mitochondrion	92.95	92.95
CDX91020	Canola	mitochondrion	92.17	91.93
AT5G14780.1	Thale cress	mitochondrion	91.91	91.67
Zm00001d011368_P001	Maize	cytosol	62.66	83.05
Zm00001d011367_P001	Maize	cytosol	62.66	83.05
Solyc02g086880.2.1	Tomato	plastid	82.25	82.68
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	60.84	82.62
VIT_14s0066g01320.t01	Wine grape	mitochondrion	81.46	81.46
TraesCS7D01G232300.1	Wheat	mitochondrion	80.16	81.43
TraesCS7A01G232200.1	Wheat	golgi	80.16	81.43
TraesCS7B01G130600.1	Wheat	mitochondrion	80.16	81.43
Zm00001d045965_P001	Maize	mitochondrion	79.9	81.38
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	79.9	81.17
Os06t0486800-01	Rice	mitochondrion	79.63	81.12
EER89775	Sorghum	mitochondrion	79.63	81.12
GSMUA_Achr3P01200_001	Banana	mitochondrion	80.94	80.94
Zm00001d053924_P001	Maize	cytosol	48.04	77.97
KRG93315	Soybean	mitochondrion	76.24	77.87
Os06t0486900-01	Rice	mitochondrion	76.24	77.25
TraesCS6D01G255200.2	Wheat	mitochondrion	75.98	77.19
TraesCS6B01G302400.2	Wheat	mitochondrion	75.98	77.19
TraesCS4D01G007200.1	Wheat	golgi	75.46	77.07
TraesCS4B01G066400.1	Wheat	mitochondrion	70.5	76.06
KRG93317	Soybean	nucleus	77.02	75.84
EES07384	Sorghum	mitochondrion	75.46	75.26
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.24	75.26
Zm00001d014163_P001	Maize	mitochondrion	46.74	73.97
Zm00001d017801_P001	Maize	mitochondrion	29.24	65.12
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	60.84	63.49
TraesCS6A01G274900.1	Wheat	mitochondrion	61.1	62.07
Zm00001d004323_P001	Maize	mitochondrion	22.72	60.0
PGSC0003DMT400068907	Potato	cytosol	23.5	59.6
Zm00001d019818_P001	Maize	mitochondrion	22.45	59.31
Zm00001d033618_P001	Maize	cytosol	59.53	59.22
CDY54697	Canola	mitochondrion	10.18	26.35
CDX67931	Canola	cytosol	20.1	24.6
CDX79406	Canola	cytosol	20.1	24.6
CDY26572	Canola	cytosol	15.14	24.07
CDX87280	Canola	cytosol	19.32	23.87
CDY58781	Canola	cytosol	19.32	23.64
CDY57070	Canola	cytosol	19.84	23.6
CDY50445	Canola	mitochondrion	22.72	23.32
CDX68275	Canola	mitochondrion	22.19	22.85
CDY17092	Canola	cytosol	6.27	22.64
CDX98054	Canola	cytosol	20.37	22.61
CDY16011	Canola	cytosol, peroxisome, plastid	17.23	22.3
CDY26571	Canola	plastid	16.71	21.62
CDY16012	Canola	cytosol, nucleus, peroxisome	13.58	21.58
CDY57736	Canola	plastid	21.41	21.52
CDY07405	Canola	cytosol	19.06	18.91
CDY04198	Canola	cytosol	18.8	18.27
CDX96054	Canola	mitochondrion	19.06	15.94
CDX75409	Canola	plastid	23.24	14.93
CDX76268	Canola	plastid	23.24	14.83
CDX72462	Canola	plastid	22.45	14.38
CDY49286	Canola	plastid	22.45	14.38
CDX69034	Canola	plastid	23.5	14.24
CDX96754	Canola	plastid	22.72	14.01
CDX83893	Canola	plastid	22.72	13.99
CDY16010	Canola	cytosol, nucleus, plastid	20.1	13.97
CDX82295	Canola	plastid	20.37	13.29
CDY22972	Canola	plastid	20.37	13.29
CDY26570	Canola	cytosol	14.62	12.44
CDY12275	Canola	cytosol	10.97	12.28
CDY01876	Canola	endoplasmic reticulum, plasma membrane	18.8	10.39
CDY57737	Canola	cytosol	1.04	2.34

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	GO:A0A078F5X4	UniProt:A0A078F5X4
EnsemblPlants:CDY09885	ProteinID:CDY09885	ProteinID:CDY09885.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1
InterPro:D-isomer_DH_NAD-bd	InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150
GO:GO:0008152	GO:GO:0008863	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616
GO:GO:0042183	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00031641001	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938
PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EEF94B	SEG:seg	:

Description

BnaC09g42760DFormate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A078F5X4]

Coordinates

chrLK031999:+:845360..847714

Molecular Weight (calculated)

42194.7 Da

IEP (calculated)

7.632

GRAVY (calculated)

-0.277

Length

383 amino acids

Sequence
(BLAST)

001: MAMRRITGAI RASCVSSSSS GYFARQFHAS SGDSKKIVGV FYKANEYASK NPNFLGCVEN ALGIRNWLES QGHHYIVTDD KEGPNCELEK HIPDLHVLIS
101: TPFHPAYVTA ERIKKAKNLQ LLLTAGIGSD HIDLQAAAAA GLTVAEVTGS NVVSVAEDEL MRILILMRNF VPGYNQVVNG EWNVAGIAYR AYDLEGKTVG
201: TVGAGRIGKL LLQRLKPFGC NLLYHDRLQM GPEMEKETGA KYVESLDEML PKCDVVVVNT PLTEKTRGMF NKEMIGKMKK GVLIVNNARG AIMDRQAVVE
301: AVESGHIGGY SGDVWDPQPA PKDHPWRYMP NQAMTPHISG TTIDAQLRYA AGTKDMLEKY FKGEDFPAQN YIVKDGELAP QYR

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.