Factsheet for Zm00001d053924_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	89.83	75.18
Zm00001d011367_P001	Maize	cytosol	91.95	75.09
Zm00001d011368_P001	Maize	cytosol	91.95	75.09
Zm00001d045965_P001	Maize	mitochondrion	91.53	57.45
EER89775	Sorghum	mitochondrion	90.68	56.91
Zm00001d014163_P001	Maize	mitochondrion	58.05	56.61
TraesCS7D01G232300.1	Wheat	mitochondrion	88.98	55.7
TraesCS7B01G130600.1	Wheat	mitochondrion	88.98	55.7
TraesCS7A01G232200.1	Wheat	golgi	88.98	55.7
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	88.56	55.44
Os06t0486800-01	Rice	mitochondrion	87.29	54.79
Zm00001d033618_P001	Maize	cytosol	88.14	54.03
TraesCS4D01G007200.1	Wheat	golgi	84.32	53.07
TraesCS4B01G066400.1	Wheat	mitochondrion	76.27	50.7
VIT_14s0066g01320.t01	Wine grape	mitochondrion	80.51	49.61
GSMUA_Achr3P01200_001	Banana	mitochondrion	80.08	49.35
Solyc02g086880.2.1	Tomato	plastid	79.66	49.34
KRG93315	Soybean	mitochondrion	78.39	49.33
PGSC0003DMT400001303	Potato	mitochondrion	79.24	49.08
KRG93317	Soybean	nucleus	80.51	48.84
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	80.08	48.71
CDY09885	Canola	mitochondrion	77.97	48.04
Bra008737.1-P	Field mustard	mitochondrion	77.97	47.92
AT5G14780.1	Thale cress	mitochondrion	77.97	47.92
CDX69558	Canola	mitochondrion	77.54	47.66
CDX85582	Canola	mitochondrion	77.12	47.52
Bra023487.1-P	Field mustard	mitochondrion	77.12	47.4
CDX91020	Canola	mitochondrion	76.27	46.88
Zm00001d004323_P001	Maize	mitochondrion	17.37	28.28
Zm00001d019818_P001	Maize	mitochondrion	16.95	27.59
Zm00001d024906_P001	Maize	cytosol	25.85	18.54
Zm00001d018790_P001	Maize	extracellular, plasma membrane	24.58	18.53
Zm00001d008883_P001	Maize	mitochondrion	24.15	17.27
Zm00001d024907_P001	Maize	mitochondrion	24.58	17.21
Zm00001d030544_P001	Maize	cytosol, extracellular	22.88	16.88
Zm00001d004451_P001	Maize	cytosol	22.88	16.02
Zm00001d005489_P006	Maize	mitochondrion	26.27	15.86
Zm00001d014919_P002	Maize	mitochondrion	22.03	12.04
Zm00001d026472_P001	Maize	plastid	25.42	9.8
Zm00001d002051_P001	Maize	plastid	25.85	9.74
Zm00001d046923_P001	Maize	plastid	23.31	9.34
Zm00001d032114_P001	Maize	plastid	25.42	9.1
Zm00001d017801_P001	Maize	mitochondrion	4.24	5.81

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.16	UniProt:A0A1D6QTI4	ProteinID:AQK60744.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016491	GO:GO:0016616	GO:GO:0016740	GO:GO:0019538
GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI00084428E8	EnsemblPlantsGene:Zm00001d053924	EnsemblPlants:Zm00001d053924_P001	EnsemblPlants:Zm00001d053924_T001	SEG:seg	:

Description

Formate dehydrogenase chloroplastic/mitochondrial

Coordinates

chr4:-:243678500..243679356

Molecular Weight (calculated)

25737.6 Da

IEP (calculated)

7.631

GRAVY (calculated)

0.168

Length

236 amino acids

Sequence
(BLAST)

001: MHVLITTPFH PAYVTAERIK KAKNLELLLT AGIGSDHIDL PAAAAAGLTV AEVTGSNTVS VAEDELLRIL ILLRNFLPGY QQVVQGEWNV AGIAHGAYDL
101: EGKTVGTVGA GRIGRLLLQR LKPFNCNLLY HDRLQIDLEL EKEIGAKFEE DLDAMLPKCD VIVINTPLTE KTRGMFNKER IAKMKKGVIV VNNARGAIMD
201: ARAVADACSS GHIAGTYYVN MFSLSLYTTV LLHKLV

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.