Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011368_P001 | Maize | cytosol | 84.3 | 70.59 |
| Zm00001d011367_P001 | Maize | cytosol | 84.3 | 70.59 |
| Zm00001d006877_P001 | Maize | cytosol, mitochondrion, plastid | 81.82 | 70.21 |
| Zm00001d004323_P001 | Maize | mitochondrion | 38.84 | 64.83 |
| Zm00001d019818_P001 | Maize | mitochondrion | 37.6 | 62.76 |
| Zm00001d053924_P001 | Maize | cytosol | 56.61 | 58.05 |
| Zm00001d045965_P001 | Maize | mitochondrion | 88.43 | 56.91 |
| EER89775 | Sorghum | mitochondrion | 86.36 | 55.59 |
| TraesCS4B01G066400.1 | Wheat | mitochondrion | 80.17 | 54.65 |
| Os06t0486800-01 | Rice | mitochondrion | 84.3 | 54.26 |
| TraesCS7A01G232200.1 | Wheat | golgi | 84.3 | 54.11 |
| TraesCS7D01G232300.1 | Wheat | mitochondrion | 84.3 | 54.11 |
| TraesCS7B01G130600.1 | Wheat | mitochondrion | 84.3 | 54.11 |
| HORVU7Hr1G047700.3 | Barley | mitochondrion, plasma membrane | 83.88 | 53.85 |
| TraesCS4D01G007200.1 | Wheat | golgi | 80.17 | 51.73 |
| KRG93315 | Soybean | mitochondrion | 77.27 | 49.87 |
| KRH20294 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 79.34 | 49.48 |
| VIT_14s0066g01320.t01 | Wine grape | mitochondrion | 78.1 | 49.35 |
| KRG93317 | Soybean | nucleus | 78.51 | 48.84 |
| GSMUA_Achr3P01200_001 | Banana | mitochondrion | 76.86 | 48.56 |
| PGSC0003DMT400001303 | Potato | mitochondrion | 76.03 | 48.29 |
| Solyc02g086880.2.1 | Tomato | plastid | 75.62 | 48.03 |
| CDY09885 | Canola | mitochondrion | 73.97 | 46.74 |
| Bra008737.1-P | Field mustard | mitochondrion | 73.97 | 46.61 |
| CDX69558 | Canola | mitochondrion | 73.97 | 46.61 |
| AT5G14780.1 | Thale cress | mitochondrion | 73.55 | 46.35 |
| Zm00001d033618_P001 | Maize | cytosol | 72.73 | 45.71 |
| CDX85582 | Canola | mitochondrion | 72.31 | 45.69 |
| Bra023487.1-P | Field mustard | mitochondrion | 71.9 | 45.31 |
| CDX91020 | Canola | mitochondrion | 71.49 | 45.05 |
| Zm00001d017801_P001 | Maize | mitochondrion | 25.62 | 36.05 |
| Zm00001d018790_P001 | Maize | extracellular, plasma membrane | 23.97 | 18.53 |
| Zm00001d024906_P001 | Maize | cytosol | 24.79 | 18.24 |
| Zm00001d008883_P001 | Maize | mitochondrion | 23.55 | 17.27 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 22.73 | 17.19 |
| Zm00001d004451_P001 | Maize | cytosol | 23.55 | 16.91 |
| Zm00001d024907_P001 | Maize | mitochondrion | 23.14 | 16.62 |
| Zm00001d005489_P006 | Maize | mitochondrion | 25.21 | 15.6 |
| Zm00001d014919_P002 | Maize | mitochondrion | 24.79 | 13.89 |
| Zm00001d002051_P001 | Maize | plastid | 25.62 | 9.9 |
| Zm00001d026472_P001 | Maize | plastid | 24.79 | 9.8 |
| Zm00001d046923_P001 | Maize | plastid | 22.73 | 9.34 |
| Zm00001d032114_P001 | Maize | plastid | 25.21 | 9.26 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.16 | UniProt:A0A1D6GQJ2 | ProteinID:AQK65405.1 | InterPro:D-isomer_DH_CS | InterPro:D-isomer_DH_CS1 |
| InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0051287 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF02826 | ScanProsite:PS00065 | ScanProsite:PS00671 |
| PANTHER:PTHR42938 | PANTHER:PTHR42938:SF1 | SUPFAM:SSF51735 | UniParc:UPI000844A78D | EnsemblPlantsGene:Zm00001d014163 | EnsemblPlants:Zm00001d014163_P001 |
| EnsemblPlants:Zm00001d014163_T001 | SEG:seg | : | : | : | : |
Description
Formate dehydrogenase chloroplastic/mitochondrial
Coordinates
chr5:+:34737873..34741999
Molecular Weight (calculated)
27020.7 Da
IEP (calculated)
9.812
GRAVY (calculated)
-0.374
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTSSLNPAR SPWKGPPPPP RIRVLAILRP GSTSVSTLGE WNVAGIAHRA YDLEGKTVGT VGAGRIGRLL LQRLKPFNCN LLYHDRLQID PELEKEIGAK
101: FEEDLDAMLP KFDVIVINTP LTEKTRGMFN KERIAKMKKG VIVVNNARGA IMDARAVVDA CSSGHIAGYG GDVWFPQPAP KDHPWRYMPN HAMTPHISRT
201: TIDAQVRYAD GVRDMLDRYF KGEDFPVQNY IVKEGQLASQ YK
101: FEEDLDAMLP KFDVIVINTP LTEKTRGMFN KERIAKMKKG VIVVNNARGA IMDARAVVDA CSSGHIAGYG GDVWFPQPAP KDHPWRYMPN HAMTPHISRT
201: TIDAQVRYAD GVRDMLDRYF KGEDFPVQNY IVKEGQLASQ YK
001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR
Arabidopsis Description
FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.