Factsheet for Zm00001d019818_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004323_P001	Maize	mitochondrion	95.86	95.86
Zm00001d017801_P001	Maize	mitochondrion	44.83	37.79
Zm00001d014163_P001	Maize	mitochondrion	62.76	37.6
Zm00001d011368_P001	Maize	cytosol	65.52	32.87
Zm00001d011367_P001	Maize	cytosol	65.52	32.87
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	60.69	31.21
Zm00001d045965_P001	Maize	mitochondrion	72.41	27.93
Os06t0486800-01	Rice	mitochondrion	68.97	26.6
EER89775	Sorghum	mitochondrion	68.97	26.6
TraesCS4B01G066400.1	Wheat	mitochondrion	63.45	25.92
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	66.21	25.46
TraesCS7A01G232200.1	Wheat	golgi	66.21	25.46
TraesCS7B01G130600.1	Wheat	mitochondrion	66.21	25.46
TraesCS7D01G232300.1	Wheat	mitochondrion	66.21	25.46
VIT_14s0066g01320.t01	Wine grape	mitochondrion	66.21	25.07
KRG93315	Soybean	mitochondrion	64.14	24.8
TraesCS4D01G007200.1	Wheat	golgi	64.14	24.8
GSMUA_Achr3P01200_001	Banana	mitochondrion	64.14	24.28
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	63.45	23.71
KRG93317	Soybean	nucleus	63.45	23.65
Solyc02g086880.2.1	Tomato	plastid	60.69	23.1
PGSC0003DMT400001303	Potato	mitochondrion	60.69	23.1
CDY09885	Canola	mitochondrion	59.31	22.45
Bra008737.1-P	Field mustard	mitochondrion	59.31	22.4
CDX69558	Canola	mitochondrion	59.31	22.4
AT5G14780.1	Thale cress	mitochondrion	57.93	21.88
CDX85582	Canola	mitochondrion	57.24	21.67
Bra023487.1-P	Field mustard	mitochondrion	57.24	21.61
CDX91020	Canola	mitochondrion	55.86	21.09
Zm00001d053924_P001	Maize	cytosol	27.59	16.95
Zm00001d033618_P001	Maize	cytosol	44.14	16.62
Zm00001d024906_P001	Maize	cytosol	20.0	8.81
Zm00001d005489_P006	Maize	mitochondrion	23.45	8.7
Zm00001d018790_P001	Maize	extracellular, plasma membrane	17.24	7.99
Zm00001d008883_P001	Maize	mitochondrion	17.93	7.88
Zm00001d024907_P001	Maize	mitochondrion	17.93	7.72
Zm00001d004451_P001	Maize	cytosol	17.93	7.72
Zm00001d030544_P001	Maize	cytosol, extracellular	14.48	6.56
Zm00001d014919_P002	Maize	mitochondrion	17.24	5.79
Zm00001d002051_P001	Maize	plastid	22.07	5.11
Zm00001d026472_P001	Maize	plastid	21.38	5.07
Zm00001d046923_P001	Maize	plastid	20.0	4.92
Zm00001d032114_P001	Maize	plastid	20.69	4.55

Protein Annotations

EnsemblPlants:Zm00001d019818_P001	EnsemblPlants:Zm00001d019818_T001	EnsemblPlantsGene:Zm00001d019818	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051287	GO:GO:0055114	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_NAD-bd	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	PFAM:PF02826	ProteinID:ONM53758.1
ScanProsite:PS00671	SUPFAM:SSF51735	UniParc:UPI0004DEBDCA	UniProt:A0A1D6I0F4	MapMan:35.1	:

Description

Formate dehydrogenase chloroplastic/mitochondrial

Coordinates

chr7:+:64690679..64692113

Molecular Weight (calculated)

15919.9 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.405

Length

145 amino acids

Sequence
(BLAST)

001: MEIGGGAYLN LKPGRATTNE TLAVEQIRKE ERGMPALAPF PFGNVAWMKK GVIVVNNARG AIMDAQAVAD ACSSGHIDAS TKGSDHPWRY MPNNAMTPHI
101: SGTTIDVQLR YADGVRDMLD RYFKGEDFPV QNYIVKEGQL ASQYQ

Best Arabidopsis Sequence Match ( AT5G14780.2 )
(BLAST)

001: MIFQSFSLLN LLMKQASSGD SKKIVGVFYK ANEYATKNPN FLGCVENALG IRDWLESQGH QYIVTDDKEG PDCELEKHIP DLHVLISTPF HPAYVTAERI
101: KKAKNLKLLL TAGIGSDHID LQAAAAAGLT VAEVTGSNVV SVAEDELMRI LILMRNFVPG YNQVVKGEWN VAGIAYRAYD LEGKTIGTVG AGRIGKLLLQ
201: RLKPFGCNLL YHDRLQMAPE LEKETGAKFV EDLNEMLPKC DVIVINMPLT EKTRGMFNKE LIGKLKKGVL IVNNARGAIM ERQAVVDAVE SGHIGGYSGD
301: VWDPQPAPKD HPWRYMPNQA MTPHTSGTTI DAQLRYAAGT KDMLERYFKG EDFPTENYIV KDGELAPQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.