Factsheet for Zm00001d045965_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

extracellular: 20408568
mitochondrion: 22607058
mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 22607058 doi

D Dahal, BP Mooney, KJ Newton

Division of Biological Sciences, University of Missouri, Columbia, MO 65211, USA.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011368_P001	Maize	cytosol	76.06	98.96
Zm00001d011367_P001	Maize	cytosol	76.06	98.96
EER89775	Sorghum	mitochondrion	98.14	98.14
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	73.4	97.87
TraesCS7D01G232300.1	Wheat	mitochondrion	94.15	93.9
TraesCS7B01G130600.1	Wheat	mitochondrion	94.15	93.9
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	94.15	93.9
Os06t0486800-01	Rice	mitochondrion	93.88	93.88
TraesCS7A01G232200.1	Wheat	golgi	93.88	93.63
Zm00001d053924_P001	Maize	cytosol	57.45	91.53
Zm00001d014163_P001	Maize	mitochondrion	56.91	88.43
TraesCS4D01G007200.1	Wheat	golgi	85.64	85.87
TraesCS4B01G066400.1	Wheat	mitochondrion	80.05	84.79
VIT_14s0066g01320.t01	Wine grape	mitochondrion	85.11	83.55
KRG93315	Soybean	mitochondrion	82.18	82.4
GSMUA_Achr3P01200_001	Banana	mitochondrion	83.78	82.25
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	82.98	80.41
KRG93317	Soybean	nucleus	82.98	80.21
Solyc02g086880.2.1	Tomato	plastid	81.12	80.05
PGSC0003DMT400001303	Potato	mitochondrion	81.12	80.05
CDY09885	Canola	mitochondrion	81.38	79.9
Bra008737.1-P	Field mustard	mitochondrion	81.38	79.69
AT5G14780.1	Thale cress	mitochondrion	81.12	79.43
CDX69558	Canola	mitochondrion	81.12	79.43
CDX85582	Canola	mitochondrion	80.05	78.59
Bra023487.1-P	Field mustard	mitochondrion	79.79	78.12
CDX91020	Canola	mitochondrion	78.99	77.34
Zm00001d004323_P001	Maize	mitochondrion	28.72	74.48
Zm00001d019818_P001	Maize	mitochondrion	27.93	72.41
Zm00001d017801_P001	Maize	mitochondrion	31.65	69.19
Zm00001d033618_P001	Maize	cytosol	70.48	68.83
Zm00001d024906_P001	Maize	cytosol	22.07	25.23
Zm00001d018790_P001	Maize	extracellular, plasma membrane	20.74	24.92
Zm00001d008883_P001	Maize	mitochondrion	21.54	24.55
Zm00001d004451_P001	Maize	cytosol	20.74	23.15
Zm00001d030544_P001	Maize	cytosol, extracellular	19.41	22.81
Zm00001d024907_P001	Maize	mitochondrion	19.95	22.26
Zm00001d005489_P006	Maize	mitochondrion	22.61	21.74
Zm00001d014919_P002	Maize	mitochondrion	19.68	17.13
Zm00001d002051_P001	Maize	plastid	22.07	13.26
Zm00001d026472_P001	Maize	plastid	21.54	13.24
Zm00001d046923_P001	Maize	plastid	20.48	13.07
Zm00001d032114_P001	Maize	plastid	22.87	13.05

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	EntrezGene:103638381	Gene3D:3.40.50.720	MapMan:50.1.16	ProteinID:AQL03538.1
EMBL:BT064467	UniProt:C0P848	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd
InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152
GO:GO:0008863	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0042183
GO:GO:0051287	GO:GO:0055114	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI0001948E5F	EnsemblPlantsGene:Zm00001d045965	EnsemblPlants:Zm00001d045965_P001	EnsemblPlants:Zm00001d045965_T001	SEG:seg

Description

Formate dehydrogenase chloroplastic/mitochondrial

Coordinates

chr9:-:50417671..50421825

Molecular Weight (calculated)

41436.8 Da

IEP (calculated)

6.794

GRAVY (calculated)

-0.239

Length

376 amino acids

Sequence
(BLAST)

001: MAMWRAAARQ LVDRALGSRA AHTSTGSKKI VGVFYKAGEY ADKNPNFVGC VEGALGIRGW LESQGHQYIV TDDKEGPNCE LEKHIEDMHV LITTPFHPAY
101: VTAERIKKAK NLELLLTAGI GSDHIDLPAA AAAGLTVAEV TGSNTVSVAE DELLRILILL RNFLPGYQQV VQGEWNVAGI AHRAYDLEGK TVGTVGAGRI
201: GRLLLQRLKP FNCNLLYHDR LQIDPELEKE IGAKFEEDLD AMLPKCDVIV INTPLTEKTR GMFNKERIAK MKKGVIVVNN ARGAIMDAQA VADACSSGHI
301: AGYGGDVWFP QPAPKDHPWR YMPNHAMTPH ISGTTIDAQL RYADGVRDML DRYFKGEDFP VQNYIVKEGQ LASQYQ

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.