Factsheet for HORVU7Hr1G047700.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G232300.1	Wheat	mitochondrion	98.94	98.94
TraesCS7B01G130600.1	Wheat	mitochondrion	98.94	98.94
TraesCS7A01G232200.1	Wheat	golgi	98.67	98.67
Zm00001d011368_P001	Maize	cytosol	72.41	94.46
Zm00001d011367_P001	Maize	cytosol	72.41	94.46
EER89775	Sorghum	mitochondrion	94.16	94.41
Zm00001d045965_P001	Maize	mitochondrion	93.9	94.15
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	70.29	93.97
Os06t0486800-01	Rice	mitochondrion	93.63	93.88
TraesCS4D01G007200.1	Wheat	golgi	89.12	89.6
Zm00001d053924_P001	Maize	cytosol	55.44	88.56
TraesCS4B01G066400.1	Wheat	mitochondrion	82.49	87.61
Zm00001d014163_P001	Maize	mitochondrion	53.85	83.88
VIT_14s0066g01320.t01	Wine grape	mitochondrion	83.29	81.98
GSMUA_Achr3P01200_001	Banana	mitochondrion	83.02	81.72
KRG93315	Soybean	mitochondrion	80.9	81.33
PGSC0003DMT400001303	Potato	mitochondrion	81.17	80.31
Solyc02g086880.2.1	Tomato	plastid	81.17	80.31
CDY09885	Canola	mitochondrion	81.17	79.9
Bra008737.1-P	Field mustard	mitochondrion	81.17	79.69
AT5G14780.1	Thale cress	mitochondrion	80.9	79.43
CDX69558	Canola	mitochondrion	80.9	79.43
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	81.7	79.38
KRG93317	Soybean	nucleus	81.7	79.18
Bra023487.1-P	Field mustard	mitochondrion	79.58	78.12
CDX85582	Canola	mitochondrion	79.05	77.81
CDX91020	Canola	mitochondrion	78.25	76.82
Zm00001d004323_P001	Maize	mitochondrion	26.26	68.28
Zm00001d033618_P001	Maize	cytosol	67.9	66.49
Zm00001d019818_P001	Maize	mitochondrion	25.46	66.21
Zm00001d017801_P001	Maize	mitochondrion	29.71	65.12
HORVU2Hr1G005210.2	Barley	mitochondrion	18.57	25.27
HORVU4Hr1G086940.2	Barley	cytosol	7.96	23.26
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	20.16	22.16
HORVU6Hr1G017010.1	Barley	cytosol	5.84	20.56
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	19.1	20.17
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	20.16	19.1
HORVU6Hr1G000650.2	Barley	peroxisome	9.28	18.13
HORVU2Hr1G005150.2	Barley	plastid	16.71	17.65
HORVU6Hr1G000640.1	Barley	cytosol	11.94	14.85
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	18.57	14.4
HORVU7Hr1G111190.2	Barley	mitochondrion	20.16	14.39
HORVU1Hr1G056180.2	Barley	plastid	22.02	13.47
HORVU2Hr1G113180.3	Barley	cytosol	16.18	13.47

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	EMBL:AK356063	EMBL:AK364536
EMBL:AK365988	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	UniProt:F2CWR0
InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152
GO:GO:0008863	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0042183
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G047700	EnsemblPlants:HORVU7Hr1G047700.3	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938
PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0002004AA7	SEG:seg	:

Description

Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:F2CWR0]

Coordinates

chrchr7H:-:160711924..160715238

Molecular Weight (calculated)

41493.9 Da

IEP (calculated)

7.002

GRAVY (calculated)

-0.225

Length

377 amino acids

Sequence
(BLAST)

001: MAAMWRAAAR QLVDRAVGSR AAHTSAGSKK IVGVFYQAGE YADKNPNFVG CVEGALGIRD WLESKGHHYI VTDDKEGLNS ELEKHIEDMH VLITTPFHPA
101: YVTAERIKKA KNLELLLTAG IGSDHIDLPA AAAAGLTVAE VTGSNTVSVA EDELMRILIL LRNFLPGYQQ VVKGEWNVAG IAHRAYDLEG KTVGTVGAGR
201: IGRLLLQRLK PFNCNLLYHD RLQINPELEK EIGAKFEEDL DAMLPKCDVV VINTPLTEKT RGMFNKEKIA KMKKGVIIVN NARGAIMDTQ AVADACSSGH
301: IAGYGGDVWF PQPAPKDHPW RYMPNHAMTP HISGTTIDAQ LRYAAGVKDM LDRYFKGEEF PVENYIVKEG ELASQYK

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.