Factsheet for HORVU1Hr1G056180.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G234300.2	Wheat	plastid	97.4	96.93
TraesCS1D01G222600.2	Wheat	plastid	96.92	96.45
TraesCS3A01G146800.1	Wheat	plastid	95.29	94.68
TraesCS1A01G221000.1	Wheat	plastid	89.29	94.34
EES15079	Sorghum	plastid	87.01	86.59
Os08t0447000-01	Rice	plastid	87.18	86.47
Zm00001d032114_P001	Maize	plastid	88.31	82.55
HORVU2Hr1G113180.3	Barley	cytosol	58.12	79.03
HORVU7Hr1G111190.2	Barley	mitochondrion	65.91	76.89
KRH23702	Soybean	extracellular	61.69	64.85
HORVU4Hr1G086940.2	Barley	cytosol	6.33	30.23
HORVU6Hr1G017010.1	Barley	cytosol	4.87	28.04
HORVU2Hr1G005210.2	Barley	mitochondrion	12.34	27.44
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	14.29	25.66
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	14.77	25.49
HORVU6Hr1G000650.2	Barley	peroxisome	7.47	23.83
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	13.47	22.02
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	13.96	21.61
HORVU2Hr1G005150.2	Barley	plastid	11.04	19.05
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	14.61	18.52
HORVU6Hr1G000640.1	Barley	cytosol	8.93	18.15

Protein Annotations

KEGG:00260+1.1.1.95	KEGG:00270+3.3.1.1	KEGG:00680+1.1.1.95	Gene3D:3.30.1330.90	Gene3D:3.30.70.260	Gene3D:3.40.50.720
MapMan:4.1.4.1.1	InterPro:ACT_dom	EMBL:AK367582	EMBL:AK375556	InterPro:ASB_dom_sf	InterPro:Ado_hCys_hydrolase_NAD-bd
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	UniProt:F2DUL4	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004617	GO:GO:0005488	GO:GO:0006564	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G056180	EnsemblPlants:HORVU1Hr1G056180.2	InterPro:IPR002912	InterPro:IPR029009
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF01842	PFAM:PF02826	InterPro:PGDH	ScanProsite:PS00065
ScanProsite:PS00671	PFscan:PS51671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF14	SMART:SM00997	SUPFAM:SSF143548
SUPFAM:SSF51735	SUPFAM:SSF52283	SUPFAM:SSF55021	TIGRFAMs:TIGR01327	UniParc:UPI0002007290	SEG:seg

Description

D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F2DUL4]

Coordinates

chrchr1H:-:411797284..411805256

Molecular Weight (calculated)

64480.1 Da

IEP (calculated)

9.038

GRAVY (calculated)

0.120

Length

616 amino acids

Sequence
(BLAST)

001: MSASRALLSS PHGGAGPAST KARARLAASS IPFARLRART AILSSPAATA PVTSSEPRRR ISRSVSDSAP RAKPAVLVAE KLGEAGLDVL RQFADVECAY
101: GMSPAELLAK VAQFDALIVR SGTKVTREVL EAGRGRLRVV GRAGVGIDNV DLQAATEAGC LVVNAPTANT VAAAEHGIAL LACMARNVSQ ADAALKAGKW
201: QRTKYVGVSL VGKTLAIMGF GKVGSEVARR AKGLGMHVIA HDPYAPADKA RAIGAELVSF EEAIAKADFI SLHMPLTPAT SKVFKDESFG KMKTGVRIIN
301: VARGGVIDED ALVRALDSGK VAQAALDVFT VEPPPKDSKL VLHENVTVTP HLGASTVEAQ EGVAIEIAEA VAGALRGELA ATAVNAPMVP AEVLSELAPY
401: VSLAEKLGRL AVQLVAGESG IKGVKVVYTS ARDPDDLDTR LVRAMVTKGI VEPVSSTFVN LVNADYTAKQ RGLRIAEERV SHDNPAAEAP LESIQVRLSH
501: VQSKFAGAIS DGGDIVVVGR VKYGVPHLTV VGPYEVDVSL EGNLILCRQI DQPGMIGKVG NILGQRNVNV SFMSVGRTSR GKQAIMAIGV DEEPDKKTLE
601: KIGAIPAIEE FVFVEL

Best Arabidopsis Sequence Match ( AT1G17745.1 )
(BLAST)

001: MAFSSSCSSV KAVNSRWTSP SPSPSSRFAV LPAFLHRRYA TSVKLTAISA ALKTVEQTTL TEDNRFSTVG SDSDEYNPTL PKPRILVTEK LGEAGVNLLR
101: EFGDVDCSYD LSPEDLKKKV AESDALIVRS GTKVTREVFE AAKGRLKVVG RAGVGIDNVD LQAATEHGCL VVNAPTANTV AAAEHGIALL ASMARNVAQA
201: DASIKAGKWE RSKYVGVSLV GKTLAVMGFG KVGTEVARRA KGLGMTVISH DPYAPADRAR ALGVDLVSFD QAISTADFVS LHMPLTPATK KVFNDETFSK
301: MKKGVRLINV ARGGVIDEDA LVRALDAGIV AQAALDVFCE EPPSKDSRLI QHENVTVTPH LGASTKEAQE GVAIEIAEAV AGALKGELSA TAVNAPMVAP
401: EVLSELTPYI VLAEKLGRLA VQLASGGKGV QSIRVVYRSA RDRDDLDTRL LRAMITKGII EPISDSYVNL VNADFIAKQK GLRISEERMV VDSSPEYPVD
501: SIQVQILNVE SNFAGAVSDA GDISIEGKVK YGVPHLTCVG SFGVDVSLEG NLILCRQVDQ PGMIGQVGNI LGEQNVNVNF MSVGRTVLRK QAIMAIGVDE
601: EPDNKTLERI GGVSAIEEFV FLKL

Arabidopsis Description

PGDHD-3-phosphoglycerate dehydrogenase [Source:TAIR;Acc:AT1G17745]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.