Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P17980_001 | Banana | cytosol | 49.61 | 59.81 |
| CDY17092 | Canola | cytosol | 40.31 | 49.06 |
| Bra035498.1-P | Field mustard | cytosol | 35.66 | 46.94 |
| PGSC0003DMT400058518 | Potato | cytosol | 47.29 | 43.88 |
| HORVU2Hr1G005210.2 | Barley | mitochondrion | 76.74 | 35.74 |
| CDY54697 | Canola | mitochondrion | 37.98 | 33.11 |
| HORVU2Hr1G005230.1 | Barley | cytosol, mitochondrion | 86.05 | 32.36 |
| TraesCS2D01G034600.1 | Wheat | mitochondrion | 82.17 | 32.12 |
| TraesCS2A01G035400.1 | Wheat | mitochondrion | 82.17 | 32.12 |
| TraesCS2B01G048500.1 | Wheat | cytosol | 81.4 | 31.16 |
| HORVU6Hr1G017010.1 | Barley | cytosol | 24.81 | 29.91 |
| KRH65202 | Soybean | cytosol | 48.06 | 27.56 |
| Zm00001d024906_P001 | Maize | cytosol | 65.12 | 25.53 |
| EES10400 | Sorghum | cytosol | 66.67 | 25.44 |
| Zm00001d004451_P001 | Maize | cytosol | 65.89 | 25.22 |
| Os04t0106400-01 | Rice | cytosol, mitochondrion, plastid | 63.57 | 24.92 |
| EES10352 | Sorghum | cytosol, mitochondrion | 64.34 | 24.56 |
| EES11738 | Sorghum | cytosol | 63.57 | 24.26 |
| Solyc08g080030.2.1 | Tomato | cytosol | 49.61 | 23.7 |
| GSMUA_Achr5P14420_001 | Banana | cytosol | 56.59 | 22.12 |
| HORVU6Hr1G000650.2 | Barley | peroxisome | 31.78 | 21.24 |
| HORVU2Hr1G005150.2 | Barley | plastid | 56.59 | 20.45 |
| PGSC0003DMT400058520 | Potato | cytosol | 51.16 | 20.31 |
| CDY16011 | Canola | cytosol, peroxisome, plastid | 46.51 | 20.27 |
| HORVU2Hr1G005140.13 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 55.81 | 20.17 |
| AT2G45630.2 | Thale cress | plastid | 51.94 | 19.82 |
| KRH48312 | Soybean | cytosol | 51.16 | 19.58 |
| CDY57070 | Canola | cytosol | 48.84 | 19.57 |
| KRH65201 | Soybean | plastid | 43.41 | 19.51 |
| VIT_02s0025g04750.t01 | Wine grape | cytosol, plasma membrane | 43.41 | 19.31 |
| VIT_02s0025g04730.t01 | Wine grape | cytosol | 47.29 | 19.24 |
| KRH48311 | Soybean | cytosol | 49.61 | 19.16 |
| Solyc01g093990.2.1 | Tomato | cytosol | 47.29 | 18.89 |
| Bra019774.1-P | Field mustard | cytosol | 50.39 | 18.84 |
| CDX98054 | Canola | cytosol | 50.39 | 18.84 |
| GSMUA_Achr5P14430_001 | Banana | mitochondrion | 44.19 | 18.75 |
| KRH48313 | Soybean | cytosol | 47.29 | 18.15 |
| KRH48310 | Soybean | cytosol | 44.19 | 17.07 |
| VIT_15s0048g01330.t01 | Wine grape | mitochondrion, peroxisome, plastid | 56.59 | 15.84 |
| Bra026967.1-P | Field mustard | cytosol, nucleus, plastid | 48.06 | 15.62 |
| CDY26571 | Canola | plastid | 33.33 | 14.53 |
| HORVU3Hr1G031200.3 | Barley | cytosol, mitochondrion | 51.94 | 13.79 |
| CDY26572 | Canola | cytosol | 21.71 | 11.62 |
| CDY16010 | Canola | cytosol, nucleus, plastid | 48.84 | 11.43 |
| Bra026966.1-P | Field mustard | cytosol | 20.93 | 11.3 |
| CDY26570 | Canola | cytosol | 31.01 | 8.89 |
| HORVU2Hr1G113180.3 | Barley | cytosol | 30.23 | 8.61 |
| HORVU7Hr1G047700.3 | Barley | mitochondrion, plasma membrane | 23.26 | 7.96 |
| HORVU5Hr1G050350.1 | Barley | mitochondrion, plastid | 23.26 | 7.54 |
| HORVU7Hr1G111190.2 | Barley | mitochondrion | 30.23 | 7.39 |
| HORVU1Hr1G056180.2 | Barley | plastid | 30.23 | 6.33 |
| CDY16012 | Canola | cytosol, nucleus, peroxisome | 6.98 | 3.73 |
| HORVU6Hr1G000640.1 | Barley | cytosol | 5.43 | 2.31 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G086940.2 | EnsemblPlantsGene:HORVU4Hr1G086940 | Gene3D:3.40.50.720 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0051287 | GO:GO:0055114 | InterPro:D-isomer_DH_NAD-bd | InterPro:NAD(P)-bd_dom_sf |
| PANTHER:PTHR10996 | PANTHER:PTHR10996:SF179 | PFAM:PF02826 | SUPFAM:SSF51735 | UniParc:UPI000B465499 | UniProt:A0A287Q0R8 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:635633516..635646837
Molecular Weight (calculated)
14049.2 Da
IEP (calculated)
5.143
GRAVY (calculated)
0.272
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMILLLNPT CSLSLNKTTR HVVNKDVLEA LGKGGVVVNI GRGANIDEEE LVIALREGKI AGAGLDIFEH EPKVPAELFS MDNVVLWPHV AVRTEESRSD
101: LCLHTIGNLE AFFSGQLLLT PVHVNSLVQ
101: LCLHTIGNLE AFFSGQLLLT PVHVNSLVQ
001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL
Arabidopsis Description
D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.