Factsheet for TraesCS2B01G048500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G034600.1	Wheat	mitochondrion	92.88	94.85
TraesCS2A01G035400.1	Wheat	mitochondrion	92.28	94.24
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	90.5	88.92
HORVU4Hr1G086940.2	Barley	cytosol	31.16	81.4
EES11738	Sorghum	cytosol	71.51	71.3
Zm00001d024906_P001	Maize	cytosol	69.14	70.82
EES10400	Sorghum	cytosol	69.73	69.53
TraesCS7B01G456600.1	Wheat	cytosol, plastid	70.62	69.19
Zm00001d004451_P001	Maize	cytosol	69.14	69.14
EES10352	Sorghum	cytosol, mitochondrion	67.95	67.75
TraesCS2B01G048100.1	Wheat	plastid	66.77	65.41
GSMUA_Achr4P17980_001	Banana	cytosol	19.88	62.62
TraesCS2B01G048000.1	Wheat	mitochondrion	59.64	62.04
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	58.16	60.68
GSMUA_Achr5P14420_001	Banana	cytosol	59.05	60.3
GSMUA_Achr5P14430_001	Banana	mitochondrion	53.41	59.21
Solyc08g080030.2.1	Tomato	cytosol	45.1	56.3
PGSC0003DMT400058518	Potato	cytosol	22.26	53.96
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	49.55	52.85
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	44.81	52.07
CDY54697	Canola	mitochondrion	22.55	51.35
Bra026966.1-P	Field mustard	cytosol	35.91	50.63
PGSC0003DMT400058520	Potato	cytosol	48.66	50.46
CDY57070	Canola	cytosol	48.07	50.31
CDY26572	Canola	cytosol	35.91	50.21
CDY17092	Canola	cytosol	15.73	50.0
VIT_02s0025g04730.t01	Wine grape	cytosol	46.88	49.84
Bra035498.1-P	Field mustard	cytosol	14.24	48.98
AT2G45630.2	Thale cress	plastid	48.96	48.82
TraesCS4B01G324200.1	Wheat	peroxisome	45.4	48.42
CDY16011	Canola	cytosol, peroxisome, plastid	42.43	48.31
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	45.1	48.1
KRH48312	Soybean	cytosol	48.07	48.07
Bra019774.1-P	Field mustard	cytosol	48.37	47.25
CDX98054	Canola	cytosol	48.37	47.25
KRH48313	Soybean	cytosol	45.7	45.83
Solyc01g093990.2.1	Tomato	cytosol	43.92	45.82
KRH48311	Soybean	cytosol	44.81	45.21
CDY26571	Canola	plastid	39.47	44.93
CDY16012	Canola	cytosol, nucleus, peroxisome	30.86	43.15
KRH48310	Soybean	cytosol	42.14	42.52
KRH65202	Soybean	cytosol	28.19	42.22
KRH65201	Soybean	plastid	34.42	40.42
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	52.52	38.39
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	38.87	33.0
CDY16010	Canola	cytosol, nucleus, plastid	48.07	29.4
CDY26570	Canola	cytosol	35.01	26.22
TraesCS5B01G226200.1	Wheat	cytosol	10.39	25.93
TraesCS7B01G373500.1	Wheat	cytosol	7.12	23.08
TraesCS6B01G004400.1	Wheat	peroxisome	23.74	20.73
TraesCS6B01G302400.2	Wheat	mitochondrion	21.96	19.63
TraesCS7B01G130600.1	Wheat	mitochondrion	21.96	19.63
TraesCS4B01G066400.1	Wheat	mitochondrion	20.47	19.44
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	21.66	19.31
TraesCS7B01G400800.1	Wheat	plastid	26.41	14.57
TraesCS1B01G234300.2	Wheat	plastid	25.52	13.89

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179
SUPFAM:SSF51735	SUPFAM:SSF52283	EnsemblPlantsGene:TraesCS2B01G048500	EnsemblPlants:TraesCS2B01G048500.1	TIGR:cd12156	SEG:seg

Description

No Description!

Coordinates

chr2B:-:24092073..24094047

Molecular Weight (calculated)

35681.0 Da

IEP (calculated)

6.852

GRAVY (calculated)

0.194

Length

337 amino acids

Sequence
(BLAST)

001: MKLATLASGG GETKPHVLLL RPVDAPFAAA LRDRFHVLDL YAPGQALPAL AFVAAAAAVP EPPRAMVIWG GVRVDASFLD AAPSLRCVVS TAAGLDHIDL
101: AECARRGVAV ANSGEVYSAD VADYAVGLLL DVLRRVSASE RYVRRGSWPA QGDYPLGSKL GGKRVGIIGL GNIGSRVAKR LEAFGCVIHY NSRKPKDSVS
201: YKYFPNVHDL AAESNVLVVA CALNKATLHI VNKDVLEALG KDGVVVNIGR GANTDEAELV IALREGKIAG AGLDVFEHEP KVPAELFTME NVVLSRHVAV
301: LTEESRSDLC LHTIGNLEAF FSGQPLLTPV HADSLAQ

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.