Factsheet for TraesCS6B01G302400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G255200.2	Wheat	mitochondrion	98.94	98.94
EES07384	Sorghum	mitochondrion	87.27	85.68
TraesCS7B01G130600.1	Wheat	mitochondrion	80.11	80.11
Os06t0486900-01	Rice	mitochondrion	79.84	79.63
KRG93315	Soybean	mitochondrion	78.51	78.93
VIT_14s0066g01320.t01	Wine grape	mitochondrion	79.84	78.59
GSMUA_Achr3P01200_001	Banana	mitochondrion	79.31	78.07
Solyc02g086880.2.1	Tomato	plastid	77.98	77.17
TraesCS6A01G274900.1	Wheat	mitochondrion	76.92	76.92
PGSC0003DMT400001303	Potato	mitochondrion	77.72	76.9
CDY09885	Canola	mitochondrion	77.19	75.98
KRG93317	Soybean	nucleus	77.98	75.58
Bra008737.1-P	Field mustard	mitochondrion	76.92	75.52
CDX69558	Canola	mitochondrion	76.92	75.52
TraesCS4B01G066400.1	Wheat	mitochondrion	71.09	75.49
CDX85582	Canola	mitochondrion	76.66	75.46
AT5G14780.1	Thale cress	mitochondrion	76.66	75.26
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	77.19	75.0
Bra023487.1-P	Field mustard	mitochondrion	76.39	75.0
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	72.94	74.93
CDX91020	Canola	mitochondrion	75.6	74.22
TraesCS2B01G048100.1	Wheat	plastid	22.55	24.71
TraesCS7B01G373500.1	Wheat	cytosol	6.63	24.04
TraesCS7B01G456600.1	Wheat	cytosol, plastid	21.75	23.84
TraesCS2B01G048000.1	Wheat	mitochondrion	19.89	23.15
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	19.36	23.1
TraesCS2B01G048500.1	Wheat	cytosol	19.63	21.96
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	18.57	21.67
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	18.04	21.52
TraesCS5B01G226200.1	Wheat	cytosol	7.69	21.48
TraesCS4B01G324200.1	Wheat	peroxisome	17.77	21.2
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	19.63	19.58
TraesCS6B01G004400.1	Wheat	peroxisome	19.36	18.91
TraesCS7B01G400800.1	Wheat	plastid	22.81	14.08
TraesCS1B01G234300.2	Wheat	plastid	22.28	13.57

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008863	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283
EnsemblPlantsGene:TraesCS6B01G302400	EnsemblPlants:TraesCS6B01G302400.2	TIGR:cd05302	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:+:542223567..542225213

Molecular Weight (calculated)

41398.9 Da

IEP (calculated)

7.675

GRAVY (calculated)

-0.270

Length

377 amino acids

Sequence
(BLAST)

001: MAMRNATQQV VRALEPSLTR SLHASPDSKK IVGVFYKGGE YAGQNPNFVG CVENALGIRS WLESQGHQYI VTDDKDGPNC ELEKHIADAH VLITTPFHPA
101: YVSADRIRRG KNLELLLTAG IGSDHIELPA AAAAGLTVAE VTGSNTVSVA EDQLMRILVL MRNFLPGHHQ AINGEWDLAG IAHRAYDLEG KTVGTVGAGR
201: IGKLLLQRLK PFGCNLLYHD RLRVDAALEK ELGAAFEEDL DAMLPKCDVV VLNMPLTEKT KGMFNKEKIA KMKKGVIIVN NARGAIMDTQ AVADACKSRH
301: IAGYGGDVWY PQPAPKEHPW RYMPNNAMTP HISGTTIDGQ LRYAAGVKDM LERYFKGQDF PEPNYIVKEG KLASQYQ

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.