Factsheet for Os06t0486900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0486800-01	Rice	mitochondrion	90.21	90.69
VIT_14s0066g01320.t01	Wine grape	mitochondrion	81.75	80.68
KRG93315	Soybean	mitochondrion	79.63	80.27
EES07384	Sorghum	mitochondrion	81.22	79.95
TraesCS6D01G255200.2	Wheat	mitochondrion	79.63	79.84
TraesCS6B01G302400.2	Wheat	mitochondrion	79.63	79.84
Solyc02g086880.2.1	Tomato	plastid	79.37	78.74
PGSC0003DMT400001303	Potato	mitochondrion	79.1	78.48
GSMUA_Achr3P01200_001	Banana	mitochondrion	79.1	78.07
KRG93317	Soybean	nucleus	79.1	76.86
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	78.84	76.8
Bra008737.1-P	Field mustard	mitochondrion	77.51	76.3
CDY09885	Canola	mitochondrion	77.25	76.24
CDX69558	Canola	mitochondrion	77.25	76.04
CDX85582	Canola	mitochondrion	76.19	75.2
AT5G14780.1	Thale cress	mitochondrion	76.19	75.0
Bra023487.1-P	Field mustard	mitochondrion	76.19	75.0
CDX91020	Canola	mitochondrion	75.13	73.96
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	65.34	67.3
TraesCS6A01G274900.1	Wheat	mitochondrion	64.29	64.46
Os07t0263400-00	Rice	cytosol	19.05	25.35
Os04t0107500-01	Rice	plasma membrane	20.9	25.0
Os01t0228600-01	Rice	extracellular	20.9	25.0
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	21.43	24.62
Os04t0107200-01	Rice	mitochondrion	21.16	24.32
Os04t0107300-01	Rice	mitochondrion, plasma membrane	20.63	23.93
Os11t0229100-01	Rice	extracellular	8.2	22.3
Os07t0264100-01	Rice	mitochondrion	21.96	22.19
Os02t0101500-02	Rice	extracellular, mitochondrion	20.63	20.21
Os04t0650800-01	Rice	plastid	23.55	14.52
Os08t0447000-01	Rice	plastid	22.22	13.53
Os06t0655100-00	Rice	plastid	21.69	12.95

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	EntrezGene:4341070	MapMan:50.1.16	EMBL:AK064610
ProteinID:BAD38302.1	ProteinID:BAF19581.1	ProteinID:BAS97837.1	ncoils:Coil	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	ProteinID:EAZ37052.1	InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008863	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0016616	GO:GO:0042183	GO:GO:0051287	GO:GO:0055114	HAMAP:MF_03210
InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os06g0486900	EnsemblPlants:Os06t0486900-01	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
ScanProsite:PS00670	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	UniProt:Q67U69	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI000042651C	RefSeq:XP_015642621.1	SEG:seg	:	:	:

Description

FDH2, OsFDH2Similar to Formate dehydrogenase, mitochondrial precursor (EC 1.2.1.2) (NAD- dependent formate dehydrogenase) (FDH). (Os06t0486900-01)

Coordinates

chr6:+:16676478..16683024

Molecular Weight (calculated)

41269.7 Da

IEP (calculated)

7.905

GRAVY (calculated)

-0.228

Length

378 amino acids

Sequence
(BLAST)

001: MAMWRAPSAA GQLLGRALAS TAAQTSAGSK KVVGVFYKGG EYADKNPNFV GCVDSALGIR GWLESKGHRY IVTDDKEGIN CELEKHIEDA HVLITTPFHP
101: AYITAERIKK AKNLELLLTA GVGSDHIDLP AAAAAGLTVA EITGSNTVSV AEDQLMRILL LLRNFLPGHH QIVNGEWNVA GIAHRTYDLE GKTVGTVGAG
201: RIGRLLLQRL KPFNCNLMYH DRVKIDPELE KEIGAKYEED LDAMLPKCDV VVINMPLTEK TRGMFNKERI AKMKKGVTIV NNARGAIMDT QAVADACASG
301: HVAGYGGDVW FPQPAPKDHP WRYMPNHAMT PHCSGTTIDG QLRYAAGVKD MLDRYFKGED FPAQNYIVKA GQLASQYQ

Best Arabidopsis Sequence Match ( AT5G14780.2 )
(BLAST)

001: MIFQSFSLLN LLMKQASSGD SKKIVGVFYK ANEYATKNPN FLGCVENALG IRDWLESQGH QYIVTDDKEG PDCELEKHIP DLHVLISTPF HPAYVTAERI
101: KKAKNLKLLL TAGIGSDHID LQAAAAAGLT VAEVTGSNVV SVAEDELMRI LILMRNFVPG YNQVVKGEWN VAGIAYRAYD LEGKTIGTVG AGRIGKLLLQ
201: RLKPFGCNLL YHDRLQMAPE LEKETGAKFV EDLNEMLPKC DVIVINMPLT EKTRGMFNKE LIGKLKKGVL IVNNARGAIM ERQAVVDAVE SGHIGGYSGD
301: VWDPQPAPKD HPWRYMPNQA MTPHTSGTTI DAQLRYAAGT KDMLERYFKG EDFPTENYIV KDGELAPQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.