Factsheet for Os04t0107300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0229100-01	Rice	extracellular	34.05	79.86
TraesCS2A01G034900.1	Wheat	mitochondrion	70.86	71.3
TraesCS2B01G048000.1	Wheat	mitochondrion	70.55	70.99
TraesCS2D01G034100.1	Wheat	mitochondrion	69.94	70.37
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	65.34	65.94
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	65.34	65.94
Os04t0107200-01	Rice	mitochondrion	61.66	61.09
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	61.04	60.49
GSMUA_Achr5P14430_001	Banana	mitochondrion	51.23	54.93
GSMUA_Achr4P17980_001	Banana	cytosol	17.79	54.21
GSMUA_Achr5P14420_001	Banana	cytosol	54.6	53.94
Os04t0107500-01	Rice	plasma membrane	49.08	50.63
Solyc08g080030.2.1	Tomato	cytosol	40.8	49.26
PGSC0003DMT400058518	Potato	cytosol	20.86	48.92
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	41.72	46.9
PGSC0003DMT400058520	Potato	cytosol	46.63	46.77
CDY57070	Canola	cytosol	46.01	46.58
Os01t0228600-01	Rice	extracellular	45.09	46.52
CDY26572	Canola	cytosol	34.05	46.06
Bra026966.1-P	Field mustard	cytosol	33.74	46.03
AT2G45630.2	Thale cress	plastid	47.55	45.86
CDY54697	Canola	mitochondrion	20.55	45.27
KRH48312	Soybean	cytosol	46.63	45.1
VIT_02s0025g04730.t01	Wine grape	cytosol	42.94	44.16
Bra019774.1-P	Field mustard	cytosol	46.63	44.06
CDX98054	Canola	cytosol	46.63	44.06
CDY16011	Canola	cytosol, peroxisome, plastid	39.88	43.92
Bra035498.1-P	Field mustard	cytosol	13.19	43.88
Solyc01g093990.2.1	Tomato	cytosol	43.25	43.65
KRH48313	Soybean	cytosol	44.79	43.45
CDY17092	Canola	cytosol	14.11	43.4
CDY26571	Canola	plastid	38.34	42.23
KRH48311	Soybean	cytosol	41.72	40.72
CDY16012	Canola	cytosol, nucleus, peroxisome	30.06	40.66
KRH48310	Soybean	cytosol	40.18	39.22
KRH65202	Soybean	cytosol	26.69	38.67
KRH65201	Soybean	plastid	32.52	36.93
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	48.47	34.27
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	37.12	30.48
CDY16010	Canola	cytosol, nucleus, plastid	46.01	27.22
CDY26570	Canola	cytosol	34.36	24.89
Os07t0263400-00	Rice	cytosol	19.63	22.54
Os02t0101500-02	Rice	extracellular, mitochondrion	26.38	22.28
Os06t0486900-01	Rice	mitochondrion	23.93	20.63
Os07t0264100-01	Rice	mitochondrion	23.01	20.05
Os06t0486800-01	Rice	mitochondrion	23.01	19.95
Os04t0650800-01	Rice	plastid	26.38	14.03
Os08t0447000-01	Rice	plastid	26.38	13.85
Os06t0655100-00	Rice	plastid	26.38	13.59

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EMBL:AK070553	ProteinID:BAF13930.1	ProteinID:BAS87545.1	ProteinID:CAE02765.1
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	ProteinID:EAZ29447.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0016618
GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os04g0107300	EnsemblPlants:Os04t0107300-01
PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF158	UniProt:Q7XRA3
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI00001B16BF	SEG:seg	:	:

Description

NAD(P)-binding domain containing protein. (Os04t0107300-01)

Coordinates

chr4:+:446012..447110

Molecular Weight (calculated)

34658.8 Da

IEP (calculated)

5.641

GRAVY (calculated)

0.302

Length

326 amino acids

Sequence
(BLAST)

001: MSSPPVLLLC RLFPGTFTDV AHRFRLLDFY ASALPIHAFL AAVAAHADPP RVVLVFGGGP IPVGAELLDA VPSLRCIITV SAGTNHIDLR ECARRGVQVA
101: NAGGIYSTDV ADYAVGLLLD VLRHVSAGDR FVRRGLCPEQ RGGDFLPLGS KIGGRRVGII GLGSIGSAIA RRLEAFGCVV SYHNRRRRED VAYAYFPTAT
201: DLAASSDVLV VACALTAETR RIVDRGVLDA LGERGVVVNV ARGANVDEAE LVRALAEGRV AGAGLEVFDD EPNVPPELWA MDNVVLTPHQ AIFTPESMAD
301: LSRVVLANLD AFFAGEPLLT RVEASE

Best Arabidopsis Sequence Match ( AT2G45630.2 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKLGRKR IGIVGLGSIG SKVATRLDAF GCQISYSSRN
201: RKPYDVPYHY YMDIEEMAAN SDALIICCEL NEKTLRLINK DVLSALGKRG VIVNVARGAI IDEEEMVRCL REGEIGGAGL DVFEDEPNVP KELFELDNVV
301: FSPHSAFMTL EGLEELGKVV VGNIEAFFSN KPLLTPVL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.