Factsheet for Os04t0106400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	73.56	72.46
TraesCS2D01G034600.1	Wheat	mitochondrion	72.64	72.42
HORVU2Hr1G005210.2	Barley	mitochondrion	60.79	72.2
EES11738	Sorghum	cytosol	72.34	70.41
Zm00001d004451_P001	Maize	cytosol	71.73	70.03
OQU81058	Sorghum	cytosol	71.12	69.85
EES10352	Sorghum	cytosol, mitochondrion	71.12	69.23
TraesCS7B01G456600.1	Wheat	cytosol, plastid	72.34	69.19
TraesCS7A01G538500.1	Wheat	cytosol	72.34	69.19
Zm00001d024906_P001	Maize	cytosol	69.0	69.0
EES10400	Sorghum	cytosol	70.52	68.64
Zm00001d024907_P001	Maize	mitochondrion	70.21	68.55
Os04t0107200-01	Rice	mitochondrion	68.09	68.09
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	70.52	67.64
HORVU4Hr1G086940.2	Barley	cytosol	24.92	63.57
Os04t0107300-01	Rice	mitochondrion, plasma membrane	60.49	61.04
Os11t0229100-01	Rice	extracellular	25.53	60.43
Os04t0107500-01	Rice	plasma membrane	55.32	57.59
GSMUA_Achr5P14430_001	Banana	mitochondrion	52.89	57.24
GSMUA_Achr5P14420_001	Banana	cytosol	57.14	56.97
GSMUA_Achr4P17980_001	Banana	cytosol	17.63	54.21
Bra026966.1-P	Field mustard	cytosol	38.6	53.14
CDY54697	Canola	mitochondrion	23.71	52.7
CDY26572	Canola	cytosol	38.6	52.7
Solyc08g080030.2.1	Tomato	cytosol	42.86	52.22
PGSC0003DMT400058518	Potato	cytosol	21.28	50.36
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	44.38	50.34
CDY57070	Canola	cytosol	49.24	50.31
Os01t0228600-01	Rice	extracellular	47.11	49.05
PGSC0003DMT400058520	Potato	cytosol	48.02	48.62
AT2G45630.2	Thale cress	plastid	49.24	47.93
Bra019774.1-P	Field mustard	cytosol	50.15	47.83
CDX98054	Canola	cytosol	50.15	47.83
VIT_02s0025g04730.t01	Wine grape	cytosol	44.98	46.69
CDY16011	Canola	cytosol, peroxisome, plastid	41.64	46.28
CDY16012	Canola	cytosol, nucleus, peroxisome	33.74	46.06
Solyc01g093990.2.1	Tomato	cytosol	44.98	45.82
KRH48311	Soybean	cytosol	45.9	45.21
KRH48312	Soybean	cytosol	45.9	44.81
KRH48313	Soybean	cytosol	45.59	44.64
CDY17092	Canola	cytosol	14.29	44.34
CDY26571	Canola	plastid	39.82	44.26
Bra035498.1-P	Field mustard	cytosol	13.07	43.88
KRH48310	Soybean	cytosol	42.55	41.92
KRH65202	Soybean	cytosol	26.75	39.11
KRH65201	Soybean	plastid	33.43	38.33
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	50.15	35.79
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	38.6	31.99
CDY16010	Canola	cytosol, nucleus, plastid	49.54	29.58
CDY26570	Canola	cytosol	34.95	25.56
Os02t0101500-02	Rice	extracellular, mitochondrion	26.14	22.28
Os06t0486900-01	Rice	mitochondrion	24.62	21.43
Os07t0263400-00	Rice	cytosol	18.24	21.13
Os06t0486800-01	Rice	mitochondrion	24.01	21.01
Os07t0264100-01	Rice	mitochondrion	21.88	19.25
Os04t0650800-01	Rice	plastid	26.75	14.36
Os08t0447000-01	Rice	plastid	26.14	13.85
Os06t0655100-00	Rice	plastid	25.84	13.43

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EMBL:AK068763	EMBL:AK072049	EMBL:AK105953	ProteinID:BAF13928.1
ProteinID:BAS87541.1	ProteinID:CAE02759.2	ProteinID:CAE04613.2	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0016618	GO:GO:0030267	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os04g0106400
EnsemblPlants:Os04t0106400-01	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996	PANTHER:PTHR10996:SF179	UniProt:Q7X6P0
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000021C70C	SEG:seg	:	:

Description

NAD(P)-binding domain containing protein. (Os04t0106400-01);NAD(P)-binding domain containing protein. (Os04t0106400-02)

Coordinates

chr4:+:400959..405337

Molecular Weight (calculated)

34467.5 Da

IEP (calculated)

6.366

GRAVY (calculated)

0.200

Length

329 amino acids

Sequence
(BLAST)

001: MASPSGAGKP PAVLLLRPVD QPFAVALRER YRVLDLLSSG QPLPAFLAAA AAAPDPPRAA VVMGGGSIRA DAALFDAVPS LRCVVSTAAG VDHIDLAECA
101: RRGVVVANSG TVYSGDVADH AVGMVIDVMR RVSAAERYVR RGLWPVQGDY PLGSKVSGKR VGIIGLGNIG SLIAKRLEAF GCVISYNSRN PKRSLPYTYY
201: ADVRALAADS DVLVVSCALN SETRHIVGGE VLDALGEGGV VVNVGRGANV DEAALVRALR EGRIAGAGLD VFEGEPKVSP ELREMENVVL TPHVAVWTAE
301: SRSDLRDHTV ANLDAFFSGD PLLTPVMLP

Best Arabidopsis Sequence Match ( AT2G45630.1 )
(BLAST)

001: MQNRSISQVA TMATSSSTEK LPRVLIVKRP DAMAVLGDGF VASTKFEILK AFESPLPLPE FLAYHSDSIS AIIAPVAAPV TADLIRILPN LRLVVTTSAG
101: VDHVDLVECR RRGISVANAG SSFSEDVADT AVGLLIDVFR RISAANRFVK QRFWPLKGDY PLGSKVCNIT CEKIKLATKM IVNGSL

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q67Y01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.