CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17092	Canola	cytosol	28.38	79.25
CDY26571	Canola	plastid	78.72	78.72
CDY26572	Canola	cytosol	60.14	73.86
CDY54697	Canola	mitochondrion	34.46	68.92
CDY57070	Canola	cytosol	74.66	68.63
CDY16012	Canola	cytosol, nucleus, peroxisome	54.73	67.22
AT1G12550.1	Thale cress	cytosol	72.3	66.25
CDX98054	Canola	cytosol	75.68	64.93
GSMUA_Achr4P17980_001	Banana	cytosol	21.28	58.88
PGSC0003DMT400058518	Potato	cytosol	24.32	51.8
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	49.32	50.34
KRH48312	Soybean	cytosol	55.41	48.66
HORVU2Hr1G005210.2	Barley	mitochondrion	44.26	47.29
GSMUA_Achr5P14420_001	Banana	cytosol	52.7	47.27
HORVU4Hr1G086940.2	Barley	cytosol	20.27	46.51
KRH48313	Soybean	cytosol	52.03	45.83
GSMUA_Achr5P14430_001	Banana	mitochondrion	46.62	45.39
CDX67931	Canola	cytosol	47.97	45.37
CDX79406	Canola	cytosol	47.97	45.37
Os04t0107500-01	Rice	plasma membrane	48.31	45.25
TraesCS2D01G034000.1	Wheat	cytosol, peroxisome, plastid	48.65	45.14
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	47.97	44.94
TraesCS2A01G034800.1	Wheat	cytosol, plasma membrane, plastid	47.97	44.94
KRH65202	Soybean	cytosol	34.12	44.89
Os04t0107200-01	Rice	mitochondrion	49.66	44.68
OQU81061	Sorghum	plastid	47.97	44.51
VIT_02s0025g04730.t01	Wine grape	cytosol	47.64	44.48
TraesCS2A01G035500.1	Wheat	extracellular, mitochondrion	50.0	44.31
TraesCS2D01G034700.1	Wheat	mitochondrion, plastid	50.0	44.31
TraesCS2A01G035400.1	Wheat	mitochondrion	49.32	44.24
TraesCS2D01G034600.1	Wheat	mitochondrion	48.99	43.94
TraesCS2D01G030900.1	Wheat	cytosol	46.62	43.67
KRH65201	Soybean	plastid	42.23	43.55
CDX87280	Canola	cytosol	45.61	43.55
KRH48311	Soybean	cytosol	48.99	43.41
PGSC0003DMT400058520	Potato	cytosol	47.64	43.38
Zm00001d008883_P001	Maize	mitochondrion	48.31	43.33
Zm00001d018790_P001	Maize	extracellular, plasma membrane	45.61	43.13
OQU88433	Sorghum	cytosol	46.28	42.68
CDY16010	Canola	cytosol, nucleus, plastid	79.39	42.65
KRH48310	Soybean	cytosol	47.97	42.52
CDY58781	Canola	cytosol	44.93	42.49
TraesCS2B01G048500.1	Wheat	cytosol	48.31	42.43
EES11740	Sorghum	mitochondrion	47.3	42.42
CDY26570	Canola	cytosol	63.85	42.0
HORVU2Hr1G005230.1	Barley	cytosol, mitochondrion	48.65	41.98
TraesCS2A01G028600.1	Wheat	extracellular, plasma membrane	47.3	41.79
Os04t0106400-01	Rice	cytosol, mitochondrion, plastid	46.28	41.64
TraesCS7A01G538500.1	Wheat	cytosol	48.31	41.57
TraesCS2B01G048100.1	Wheat	plastid	48.31	41.57
Zm00001d024906_P001	Maize	cytosol	45.95	41.34
TraesCS7B01G456600.1	Wheat	cytosol, plastid	47.97	41.28
OQU81058	Sorghum	cytosol	46.62	41.19
TraesCS2A01G034900.1	Wheat	mitochondrion	44.93	41.05
Zm00001d024907_P001	Maize	mitochondrion	46.62	40.95
TraesCS2B01G048000.1	Wheat	mitochondrion	44.59	40.74
EES11738	Sorghum	cytosol	45.95	40.24
TraesCS2D01G034100.1	Wheat	mitochondrion	43.92	40.12
HORVU2Hr1G005140.13	Barley	endoplasmic reticulum, extracellular, mitochondrion	48.31	40.06
Os04t0107300-01	Rice	mitochondrion, plasma membrane	43.92	39.88
EES10400	Sorghum	cytosol	45.27	39.65
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	42.91	39.32
TraesCSU01G226500.1	Wheat	extracellular, golgi, mitochondrion	42.91	39.32
Zm00001d004451_P001	Maize	cytosol	44.59	39.17
EES10352	Sorghum	cytosol, mitochondrion	44.59	39.05
TraesCS2A01G035000.2	Wheat	mitochondrion, plastid	46.28	37.85
TraesCS2D01G034300.1	Wheat	plastid	45.95	37.57
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	56.08	36.01
Os11t0229100-01	Rice	extracellular	16.55	35.25
Solyc03g120660.2.1	Tomato	cytosol	17.91	33.54
HORVU2Hr1G005150.2	Barley	plastid	33.45	27.73
CDY07405	Canola	cytosol	23.65	18.13
CDY57736	Canola	plastid	23.31	18.11
CDY04198	Canola	cytosol	23.65	17.77
CDX85582	Canola	mitochondrion	22.97	17.75
CDX68275	Canola	mitochondrion	21.96	17.47
CDY09885	Canola	mitochondrion	22.3	17.23
CDX91020	Canola	mitochondrion	22.3	17.19
CDY50445	Canola	mitochondrion	21.62	17.16
CDX69558	Canola	mitochondrion	21.96	16.93
CDX96054	Canola	mitochondrion	23.65	15.28
CDX96754	Canola	plastid	26.35	12.56
CDX83893	Canola	plastid	26.35	12.54
CDY49286	Canola	plastid	25.0	12.37
CDX72462	Canola	plastid	25.0	12.37
CDX76268	Canola	plastid	25.0	12.33
CDX75409	Canola	plastid	24.66	12.25
CDX82295	Canola	plastid	23.65	11.93
CDY22972	Canola	plastid	23.65	11.93
CDX69034	Canola	plastid	24.66	11.55
CDY12275	Canola	cytosol	12.16	10.53
CDY01876	Canola	endoplasmic reticulum, plasma membrane	23.65	10.1
CDY57737	Canola	cytosol	1.35	2.34

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078FSE7	UniProt:A0A078FSE7	EnsemblPlants:CDY16011	ProteinID:CDY16011
ProteinID:CDY16011.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090397001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	PANTHER:PTHR10996
PANTHER:PTHR10996:SF179	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EDF83F	SEG:seg	:

Description

BnaC08g41120DBnaC08g41120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSE7]

Coordinates

chrLK032060:+:184435..185513

Molecular Weight (calculated)

32003.1 Da

IEP (calculated)

5.898

GRAVY (calculated)

0.236

Length

296 amino acids

Sequence
(BLAST)

001: MSESPLVLVQ RPPTFDFMDE LLSRNFPVLT THHTSSAPLL NSLYRHASSI RAVVNMAMLK LDADLLSHLP SLQLLVCTSV GTEHIDLAEC KRRGIAVTNA
101: GEAFSEDVAD CAVGLLISVL RKIPAADRYV RSEKWVKFGE FQLGIKLSGK RVGILGLGSI GITYPYYPDV LSLAANNEVI ILCCALNDQM RHIVNREVME
201: SLGKNGVIIN VGRGGLIDEK EMVKCLVDGV IGGAGLDVFE KEPGGPEELF GLDNVVLSPH CAIATPGSLN NIAQLTLANL KAFFSNQPLI SPVRLD

Best Arabidopsis Sequence Match ( AT1G12550.1 )
(BLAST)

001: MAESSEPPVV LLHRPPSLTF MDEILTREFR TLITDTSSSE SLPSFFPRHA SSARAFVISG RLPVTDELLS HLPSLQILVC TSVGIDHIDL AACKRRGIVI
101: TNAGNAFSDD VADCAVGLLI SVLRRIPAAD RYVRSGNWAK FGDFQLGSKV SGKRVGIVGL GSIGSFVAKR LESFGCVISY NSRSQKQSSP YRYYSDILSL
201: AENNDVLVLC CSLTDETHHI VNREVMELLG KDGVVINVGR GKLIDEKEMV KCLVDGVIGG AGLDVFENEP AVPQELFGLD NVVLSPHFAV ATPGSLDNVA
301: QIALANLKAF FSNRPLLSPV QLD

Arabidopsis Description

HPR3Glyoxylate/hydroxypyruvate reductase HPR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.