CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004275.1-P	Field mustard	cytosol	55.41	99.48
CDY07405	Canola	cytosol	54.83	98.45
AT1G68010.2	Thale cress	cytosol	53.82	96.38
CDY04198	Canola	cytosol	54.11	95.18
Solyc01g111630.2.1	Tomato	nucleus, plastid	50.51	90.67
PGSC0003DMT400015828	Potato	cytosol	50.22	90.16
CDX96054	Canola	mitochondrion	59.02	89.3
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	49.64	89.12
KRG90684	Soybean	nucleus	48.48	87.05
KRH36064	Soybean	nucleus	48.2	86.53
TraesCS6D01G001700.1	Wheat	golgi, plastid	47.33	84.97
TraesCS6B01G004400.1	Wheat	peroxisome	47.33	84.97
TraesCS6A01G000400.1	Wheat	peroxisome	47.19	84.72
Os02t0101500-02	Rice	extracellular, mitochondrion	47.04	84.46
GSMUA_Achr5P18940_001	Banana	cytosol	19.05	84.08
KXG29243	Sorghum	cytosol	45.6	82.94
HORVU6Hr1G017010.1	Barley	cytosol	12.7	82.24
GSMUA_Achr5P18950_001	Banana	cytosol	26.41	81.33
TraesCS5B01G226200.1	Wheat	cytosol	13.56	69.63
HORVU6Hr1G000640.1	Barley	cytosol	30.01	68.65
Zm00001d014919_P002	Maize	mitochondrion	41.56	66.67
HORVU6Hr1G000650.2	Barley	peroxisome	18.33	65.8
CDX67931	Canola	cytosol	13.42	29.71
CDX79406	Canola	cytosol	13.42	29.71
CDY17092	Canola	cytosol	4.47	29.25
CDX87280	Canola	cytosol	12.7	28.39
CDY58781	Canola	cytosol	12.41	27.48
CDY57070	Canola	cytosol	12.27	26.4
CDY54697	Canola	mitochondrion	5.63	26.35
CDX98054	Canola	cytosol	12.41	24.93
CDY26572	Canola	cytosol	8.23	23.65
CDY16011	Canola	cytosol, peroxisome, plastid	10.1	23.65
CDY57736	Canola	plastid	12.12	22.05
CDY16012	Canola	cytosol, nucleus, peroxisome	7.22	20.75
CDY26571	Canola	plastid	8.8	20.61
CDX68275	Canola	mitochondrion	10.97	20.43
CDY50445	Canola	mitochondrion	10.97	20.38
CDX85582	Canola	mitochondrion	10.53	19.06
CDY09885	Canola	mitochondrion	10.39	18.8
CDX69558	Canola	mitochondrion	10.25	18.49
CDX91020	Canola	mitochondrion	10.1	18.23
CDX82295	Canola	plastid	15.01	17.72
CDY22972	Canola	plastid	14.86	17.55
CDX75409	Canola	plastid	14.43	16.78
CDY49286	Canola	plastid	14.29	16.56
CDX72462	Canola	plastid	14.29	16.56
CDX83893	Canola	plastid	14.72	16.4
CDX96754	Canola	plastid	14.57	16.26
CDX76268	Canola	plastid	13.85	16.0
CDX69034	Canola	plastid	14.43	15.82
CDY16010	Canola	cytosol, nucleus, plastid	11.83	14.88
CDY26570	Canola	cytosol	8.37	12.89
CDY12275	Canola	cytosol	6.2	12.57
CDY57737	Canola	cytosol	1.59	6.43

Protein Annotations

MapMan:1.3.6	Gene3D:3.40.50.720	MapMan:5.2.7.1	GO:A0A078EL46	EnsemblPlants:CDY01876	ProteinID:CDY01876
ProteinID:CDY01876.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00113061001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
PANTHER:PTHR10996	PANTHER:PTHR10996:SF137	SUPFAM:SSF51735	SUPFAM:SSF52283	TMHMM:TMhelix	UniParc:UPI0004EEFBDC
SEG:seg	:	:	:	:	:

Description

BnaC06g29160D

Coordinates

chrLK031929:+:985498..992975

Molecular Weight (calculated)

77245.2 Da

IEP (calculated)

8.886

GRAVY (calculated)

0.243

Length

693 amino acids

Sequence
(BLAST)

001: MIFFYLDSSF FLLVGELGLK MQVKMGKEKE RGRPEKLSVY LYIPNIVGYM RVVLNCVAFV LLCVSPTKHS SPSFISSAFV VMLWMAGALV YLTKPRLAIT
101: VIICTRKLEL DSFLLLSSSV STFGAVLDMV TDRVSTACLL VILSQVYRPS LVFLSLLALD IASHWLQMYS SHKDVKDSTS WLFRLYYGNR IFMCYCCVSC
201: EVLYIILLLI ANNQTENLLN VSSLPSLLLC LLSTQLLMKR RSCFRLSRIM DTSALSRYGE PKVLSFETPL HRNTLFSAMS KPVAIEVYNP NGKYRVVSTK
301: PMPGTRWINL LVDQGCRVEI CHLKKTILSV EDIIDLIGNR CDGVIGQLTE DWGETLFSAL SKAGGKAFSN MAVGYNNVDV EAANKYGIAV GNTPGVLTET
401: TAELAASLSL AAARRIVEAD GFMRAGLYEG WLPHLFVGNL LKGQTVGVIG AGRIGSAYAR MMVEGFKMNL IYFDLYQSTR LEKFVTAYGQ FLKANGEQPV
501: TWKRASSMEE VLREADLISL HPVLDKTTYH LVNKERLAMM KKEAILVNCS RGPVIDEEAL VNHLRENPMF RVGLDVFEEE PFMKPGLADM KNAIVVPHIA
601: SASKWTREGM ATLAALNVVG RIKGYPIWSD PNRVDPFLNE NASPPNASPS IVNSKALGLP VSKLASGSFL WNTLCLLIRG QRRELFFWTM MVL

Best Arabidopsis Sequence Match ( AT1G68010.1 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.