CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003537.1-P	Field mustard	cytosol	99.04	99.04
CDX79406	Canola	cytosol	97.12	97.12
AT1G79870.1	Thale cress	cytosol	86.9	86.9
CDX87280	Canola	cytosol	85.62	86.45
CDY58781	Canola	cytosol	85.62	85.62
Solyc03g120670.2.1	Tomato	cytosol, nucleus, plastid	78.27	78.27
KRH47286	Soybean	nucleus	74.76	74.76
Solyc12g044260.1.1	Tomato	cytosol	74.44	74.44
VIT_09s0002g04300.t01	Wine grape	cytosol	74.44	74.44
PGSC0003DMT400019584	Potato	cytosol	73.8	73.8
KRH44352	Soybean	peroxisome	35.78	73.2
Solyc12g044250.1.1	Tomato	vacuole	72.52	72.06
PGSC0003DMT400019586	Potato	extracellular	70.29	69.84
GSMUA_Achr3P03420_001	Banana	cytosol	69.33	68.67
TraesCS3A01G153500.1	Wheat	peroxisome	68.69	67.61
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	68.05	67.41
TraesCS3D01G160800.1	Wheat	cytosol	68.37	67.3
Os01t0228600-01	Rice	extracellular	67.73	67.09
KXG31500	Sorghum	cytosol	66.77	66.35
TraesCS4B01G324200.1	Wheat	peroxisome	66.13	65.51
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	65.5	65.5
TraesCS5A01G496700.1	Wheat	cytosol, peroxisome, plastid	64.22	63.61
Solyc03g120680.2.1	Tomato	nucleus	62.62	63.02
KRH09880	Soybean	cytosol	60.7	62.71
GSMUA_Achr3P31530_001	Banana	cytosol	61.02	60.44
Zm00001d030544_P001	Maize	cytosol, extracellular	60.06	58.75
CDY17092	Canola	cytosol	17.89	52.83
CDY54697	Canola	mitochondrion	24.6	52.03
CDY26572	Canola	cytosol	38.66	50.21
CDY16011	Canola	cytosol, peroxisome, plastid	45.37	47.97
CDY57070	Canola	cytosol	48.56	47.2
CDX98054	Canola	cytosol	51.12	46.38
HORVU3Hr1G031200.3	Barley	cytosol, mitochondrion	68.37	44.03
CDY26571	Canola	plastid	39.94	42.23
CDY16012	Canola	cytosol, nucleus, peroxisome	30.99	40.25
CDY16010	Canola	cytosol, nucleus, plastid	51.12	29.04
CDY26570	Canola	cytosol	36.1	25.11
CDY07405	Canola	cytosol	29.71	24.09
CDY04198	Canola	cytosol	29.71	23.6
CDX68275	Canola	mitochondrion	25.88	21.77
CDY50445	Canola	mitochondrion	25.88	21.72
CDX96054	Canola	mitochondrion	29.71	20.31
CDY09885	Canola	mitochondrion	24.6	20.1
CDX69558	Canola	mitochondrion	24.6	20.05
CDX85582	Canola	mitochondrion	23.96	19.58
CDX91020	Canola	mitochondrion	23.32	19.01
CDY57736	Canola	plastid	21.09	17.32
CDY01876	Canola	endoplasmic reticulum, plasma membrane	29.71	13.42
CDX96754	Canola	plastid	25.56	12.88
CDX83893	Canola	plastid	25.56	12.86
CDY49286	Canola	plastid	24.28	12.71
CDX72462	Canola	plastid	24.28	12.71
CDX75409	Canola	plastid	23.96	12.58
CDX76268	Canola	plastid	23.96	12.5
CDY22972	Canola	plastid	23.0	12.27
CDX82295	Canola	plastid	23.0	12.27
CDX69034	Canola	plastid	23.96	11.87
TraesCS3D01G160900.1	Wheat	cytosol	7.03	11.83
CDY12275	Canola	cytosol	12.46	11.4
CDY57737	Canola	cytosol	1.6	2.92

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078BT38	EnsemblPlants:CDX67931	ProteinID:CDX67931	ProteinID:CDX67931.1
InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00099139001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996
PANTHER:PTHR10996:SF139	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EDDCD8	SEG:seg	:

Description

BnaA07g19710D

Coordinates

chrLK031787:+:2955331..2956913

Molecular Weight (calculated)

34376.8 Da

IEP (calculated)

6.402

GRAVY (calculated)

0.011

Length

313 amino acids

Sequence
(BLAST)

001: MESIGVLMMC PMNSYLENEL QKRYNLHRFW TCPEKSVFLE THRSSIRAIV GNASVGADAK LIDDLPKLEI ISSFSVGVDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKYGDFQLTT KFSGKSVGII GLGRIGAAIA KRAQGFNCPI NYFSRTEKPD VGYKYYPTVV ELAQNSDILV
201: VACALTDETR HIVNREVMDA LGAKGVLINI GRGPHIDEKE MVKALTEGRL GGAGLDVFEQ EPHVPEELFG LENVVLLPHV ASATVETRTA MADLVMGNLE
301: AHFAGKPLLT QVV

Best Arabidopsis Sequence Match ( AT1G79870.1 )
(BLAST)

001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV

Arabidopsis Description

HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.