CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76268	Canola	plastid	96.06	61.0
Bra034616.1-P	Field mustard	plastid	95.54	60.57
CDX75409	Canola	plastid	90.29	57.72
CDY49286	Canola	plastid	90.29	57.53
CDX72462	Canola	plastid	90.03	57.36
CDX69034	Canola	plastid	90.81	54.75
PGSC0003DMT400059818	Potato	plastid	79.0	50.59
Solyc10g049890.1.1	Tomato	plastid	79.0	50.59
KRH35731	Soybean	nucleus	78.22	50.17
KRG91030	Soybean	endoplasmic reticulum	76.9	49.24
CDY22972	Canola	plastid	74.02	48.04
CDX82295	Canola	plastid	73.75	47.87
GSMUA_Achr4P11440_001	Banana	plastid	70.08	46.92
GSMUA_Achr4P04100_001	Banana	plastid	71.39	46.9
Os04t0650800-01	Rice	plastid	75.33	46.82
Zm00001d026472_P001	Maize	plastid	74.8	46.57
EES12983	Sorghum	plastid	74.8	45.97
VIT_03s0180g00130.t01	Wine grape	cytosol	77.69	45.33
TraesCS2A01G508900.1	Wheat	plastid	72.7	44.97
Zm00001d002051_P001	Maize	plastid	73.75	44.89
HORVU2Hr1G113180.3	Barley	cytosol	51.97	43.71
CDX83893	Canola	plastid	70.87	43.41
CDX96754	Canola	plastid	70.6	43.32
CDY12275	Canola	cytosol	30.97	34.5
CDY17092	Canola	cytosol	6.82	24.53
CDY57070	Canola	cytosol	20.21	23.91
CDY16011	Canola	cytosol, peroxisome, plastid	18.11	23.31
CDX87280	Canola	cytosol	18.9	23.23
CDY58781	Canola	cytosol	18.9	23.0
CDY54697	Canola	mitochondrion	8.92	22.97
CDY26572	Canola	cytosol	14.44	22.82
CDX98054	Canola	cytosol	20.21	22.32
CDX85582	Canola	mitochondrion	22.31	22.19
CDY07405	Canola	cytosol	22.31	22.02
CDX91020	Canola	mitochondrion	22.05	21.88
CDY04198	Canola	cytosol	22.31	21.57
CDX68275	Canola	mitochondrion	21.0	21.51
CDY50445	Canola	mitochondrion	21.0	21.45
CDY09885	Canola	mitochondrion	21.52	21.41
CDX69558	Canola	mitochondrion	21.52	21.35
CDY16012	Canola	cytosol, nucleus, peroxisome	13.39	21.16
CDX67931	Canola	cytosol	17.32	21.09
CDX79406	Canola	cytosol	17.06	20.77
CDY26571	Canola	plastid	15.22	19.59
CDX96054	Canola	mitochondrion	22.57	18.78
CDY16010	Canola	cytosol, nucleus, plastid	21.52	14.88
CDY26570	Canola	cytosol	16.01	13.56
CDY01876	Canola	endoplasmic reticulum, plasma membrane	22.05	12.12
CDY57737	Canola	cytosol	0.79	1.75

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.720	MapMan:4.1.4.1.1	GO:A0A078IZA6	UniProt:A0A078IZA6	InterPro:Ado_hCys_hydrolase_NAD-bd
EnsemblPlants:CDY57736	ProteinID:CDY57736	ProteinID:CDY57736.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1
InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00022584001
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671
PANTHER:PTHR42938	PANTHER:PTHR42938:SF14	MetaCyc:PWY-5041	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283
UniPathway:UPA00314	UniParc:UPI0004EE18B0	SEG:seg	:	:	:

Description

BnaC03g77030DBnaC03g77030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZA6]

Coordinates

chrLK033600:+:7935..9416

Molecular Weight (calculated)

39670.7 Da

IEP (calculated)

5.997

GRAVY (calculated)

0.166

Length

381 amino acids

Sequence
(BLAST)

001: MSAAAAYSTI STLSLSSRSP LPSAISLPSR SLNTPRRRLI LVSCTAGDGS SKPTILVAEK LGEAGVKLLE GFANVDCSYN MTPEELNTKI SLCDALIVRS
101: GTKVGREVFE SSRGRLKVVG RAGVGIDNVD LSAATEFGCL VVNAPTANTI AAAEHGIALL ASMARNVAQA DASVKDGEWK RNKYVGVSLV GKTLAVMGFG
201: KVGTEVARRA KGLGMRVIAH DPYAPADRAH AIGVELVSFD EALATADFIS LHMPLTPATN KILNDETFAK MKKGVRIVNV ARGGVIDEDA LVRALDAGIV
301: SQAALDVFTK EPPAIDSPLV QHENVTVTPH LGASTMEAQE GVAIEIAEAV VGALNGELAA TAVNAPMVSA ERCSSWLEEA A

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.