CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008737.1-P	Field mustard	mitochondrion	99.48	99.48
CDY09885	Canola	mitochondrion	98.18	98.43
CDX85582	Canola	mitochondrion	92.19	92.43
AT5G14780.1	Thale cress	mitochondrion	91.67	91.67
CDX91020	Canola	mitochondrion	91.41	91.41
Solyc02g086880.2.1	Tomato	plastid	82.55	83.2
Zm00001d011368_P001	Maize	cytosol	62.24	82.7
Zm00001d011367_P001	Maize	cytosol	62.24	82.7
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	60.42	82.27
VIT_14s0066g01320.t01	Wine grape	mitochondrion	81.51	81.72
TraesCS7D01G232300.1	Wheat	mitochondrion	79.69	81.17
TraesCS7B01G130600.1	Wheat	mitochondrion	79.69	81.17
TraesCS7A01G232200.1	Wheat	golgi	79.69	81.17
Zm00001d045965_P001	Maize	mitochondrion	79.43	81.12
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	79.43	80.9
Os06t0486800-01	Rice	mitochondrion	79.17	80.85
EER89775	Sorghum	mitochondrion	79.17	80.85
GSMUA_Achr3P01200_001	Banana	mitochondrion	80.21	80.42
Zm00001d053924_P001	Maize	cytosol	47.66	77.54
KRG93315	Soybean	mitochondrion	75.52	77.33
Os06t0486900-01	Rice	mitochondrion	76.04	77.25
TraesCS6D01G255200.2	Wheat	mitochondrion	75.78	77.19
TraesCS6B01G302400.2	Wheat	mitochondrion	75.52	76.92
TraesCS4D01G007200.1	Wheat	golgi	75.0	76.8
TraesCS4B01G066400.1	Wheat	mitochondrion	70.31	76.06
KRG93317	Soybean	nucleus	76.82	75.84
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.04	75.26
EES07384	Sorghum	mitochondrion	75.0	75.0
Zm00001d014163_P001	Maize	mitochondrion	46.61	73.97
Zm00001d017801_P001	Maize	mitochondrion	28.91	64.53
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	60.68	63.49
TraesCS6A01G274900.1	Wheat	mitochondrion	60.94	62.07
Zm00001d004323_P001	Maize	mitochondrion	22.66	60.0
PGSC0003DMT400068907	Potato	cytosol	23.44	59.6
Zm00001d019818_P001	Maize	mitochondrion	22.4	59.31
Zm00001d033618_P001	Maize	cytosol	59.38	59.22
CDY54697	Canola	mitochondrion	10.16	26.35
CDX67931	Canola	cytosol	20.05	24.6
CDX79406	Canola	cytosol	20.05	24.6
CDY26572	Canola	cytosol	15.1	24.07
CDX87280	Canola	cytosol	19.27	23.87
CDY58781	Canola	cytosol	19.27	23.64
CDY57070	Canola	cytosol	19.79	23.6
CDY50445	Canola	mitochondrion	22.66	23.32
CDX68275	Canola	mitochondrion	22.14	22.85
CDY17092	Canola	cytosol	6.25	22.64
CDX98054	Canola	cytosol	20.31	22.61
CDY16011	Canola	cytosol, peroxisome, plastid	16.93	21.96
CDY16012	Canola	cytosol, nucleus, peroxisome	13.54	21.58
CDY57736	Canola	plastid	21.35	21.52
CDY26571	Canola	plastid	16.41	21.28
CDY07405	Canola	cytosol	18.75	18.65
CDY04198	Canola	cytosol	18.49	18.02
CDX96054	Canola	mitochondrion	18.75	15.72
CDX75409	Canola	plastid	23.18	14.93
CDX76268	Canola	plastid	23.18	14.83
CDX72462	Canola	plastid	22.4	14.38
CDY49286	Canola	plastid	22.4	14.38
CDX69034	Canola	plastid	23.44	14.24
CDX96754	Canola	plastid	22.92	14.17
CDX83893	Canola	plastid	22.92	14.15
CDY16010	Canola	cytosol, nucleus, plastid	20.05	13.97
CDX82295	Canola	plastid	20.31	13.29
CDY22972	Canola	plastid	20.31	13.29
CDY26570	Canola	cytosol	14.58	12.44
CDY12275	Canola	cytosol	10.94	12.28
CDY01876	Canola	endoplasmic reticulum, plasma membrane	18.49	10.25
CDY57737	Canola	cytosol	1.04	2.34

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	GO:A0A078C3H3	EnsemblPlants:CDX69558
ProteinID:CDX69558	ProteinID:CDX69558.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd
InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008863	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135566001
HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670
ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0004EE8200
SEG:seg	:	:	:	:	:

Description

BnaA10g19070D

Coordinates

chrLK031790:-:806210..808639

Molecular Weight (calculated)

42286.8 Da

IEP (calculated)

7.926

GRAVY (calculated)

-0.276

Length

384 amino acids

Sequence
(BLAST)

001: MAMRRVTRAA IRASCVSSSS SGYFARKFNA SSGDSKKIVG VFYKANEYAS KNPNFLGCVE NALGIRSWLE SQGHHYIVTD DKEGPNCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL QLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVN GEWNVAGIAY RAYDLEGKTV
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MGPEMENETG AKYVESLDEM LPKCDVVVVN TPLTEKTRGM FNKEMIGKMK KGVLIVNNAR GAIMDRQAVV
301: EAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHIS GTTIDAQLRY AAGTKDMLEK YFKGEDFPAQ NYIVKDGELA PQYR

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.