Factsheet for Zm00001d033618_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053924_P001	Maize	cytosol	54.03	88.14
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	62.08	84.75
Zm00001d011368_P001	Maize	cytosol	62.86	83.74
Zm00001d011367_P001	Maize	cytosol	62.86	83.74
Zm00001d014163_P001	Maize	mitochondrion	45.71	72.73
Zm00001d045965_P001	Maize	mitochondrion	68.83	70.48
EER89775	Sorghum	mitochondrion	68.57	70.21
TraesCS7D01G232300.1	Wheat	mitochondrion	66.75	68.17
TraesCS7B01G130600.1	Wheat	mitochondrion	66.75	68.17
TraesCS7A01G232200.1	Wheat	golgi	66.75	68.17
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	66.49	67.9
Os06t0486800-01	Rice	mitochondrion	65.97	67.55
TraesCS4D01G007200.1	Wheat	golgi	63.64	65.33
TraesCS4B01G066400.1	Wheat	mitochondrion	59.48	64.51
VIT_14s0066g01320.t01	Wine grape	mitochondrion	61.56	61.88
GSMUA_Achr3P01200_001	Banana	mitochondrion	61.56	61.88
KRG93315	Soybean	mitochondrion	60.0	61.6
PGSC0003DMT400001303	Potato	mitochondrion	60.52	61.15
Solyc02g086880.2.1	Tomato	plastid	60.52	61.15
KRG93317	Soybean	nucleus	61.56	60.93
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	61.04	60.57
CDY09885	Canola	mitochondrion	59.22	59.53
Bra008737.1-P	Field mustard	mitochondrion	59.22	59.38
CDX69558	Canola	mitochondrion	59.22	59.38
AT5G14780.1	Thale cress	mitochondrion	58.96	59.11
CDX85582	Canola	mitochondrion	58.7	59.01
Bra023487.1-P	Field mustard	mitochondrion	58.7	58.85
CDX91020	Canola	mitochondrion	58.18	58.33
Zm00001d004323_P001	Maize	mitochondrion	17.4	46.21
Zm00001d019818_P001	Maize	mitochondrion	16.62	44.14
Zm00001d017801_P001	Maize	mitochondrion	12.73	28.49
Zm00001d030544_P001	Maize	cytosol, extracellular	17.92	21.56
Zm00001d024906_P001	Maize	cytosol	18.18	21.28
Zm00001d018790_P001	Maize	extracellular, plasma membrane	16.88	20.77
Zm00001d008883_P001	Maize	mitochondrion	17.66	20.61
Zm00001d004451_P001	Maize	cytosol	17.66	20.18
Zm00001d024907_P001	Maize	mitochondrion	17.66	20.18
Zm00001d005489_P006	Maize	mitochondrion	19.22	18.93
Zm00001d014919_P002	Maize	mitochondrion	16.62	14.81
Zm00001d026472_P001	Maize	plastid	17.66	11.11
Zm00001d002051_P001	Maize	plastid	17.92	11.02
Zm00001d046923_P001	Maize	plastid	16.62	10.87
Zm00001d032114_P001	Maize	plastid	18.44	10.77

Protein Annotations

Gene3D:2.130.10.10	Gene3D:3.40.50.720	MapMan:50.1.16	UniProt:A0A1D6L0I3	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	InterPro:IPR015943	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM08075.1	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	ScanProsite:PS00670	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI0008450C22	InterPro:WD40/YVTN_repeat-like_dom_sf	EnsemblPlantsGene:Zm00001d033618	EnsemblPlants:Zm00001d033618_P001	EnsemblPlants:Zm00001d033618_T001	SEG:seg

Description

formate dehydrogenase2

Coordinates

chr1:+:269003206..269006503

Molecular Weight (calculated)

41833.1 Da

IEP (calculated)

5.255

GRAVY (calculated)

-0.115

Length

385 amino acids

Sequence
(BLAST)

001: MVGRSSNFGA SDAFGAVCTG TGATPRTSNY EDDPPIAPVP EGRQRSRFLA VGSYDNTIRI LSLDPDDCLQ PLSVQSVSSA PESLLFLEVQ ASVGGEDGAD
101: YPANLFLNAG LQNGVLFHTN VDMVTELEKH IEDMHVLITT PFHPAYVTAE RIKKAKNLEL LLTAGIGSDL PAAAAVGLTM AEVTGSNTVS VAEDELLRIL
201: ILLRNFLPGY QQVVQGEWNV AGISHRAYDL EGKTVGTVGA GRIGRLLLQR LKPFNCNLLY HDRLQIDPEL EKEIGAKFEE DLDAMLPKCD VIVINTPLTE
301: KTRGMFNKER IAKMKERVIV VNNARGAIMD ARAVADACSS GHIAGYGGDV WFPQPAPKDH PWRYMPNHAM APHISGTTID AQVRF

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.