Factsheet for GSMUA_Achr3P01200_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011368_P001	Maize	cytosol	65.01	86.16
Zm00001d011367_P001	Maize	cytosol	65.01	86.16
VIT_14s0066g01320.t01	Wine grape	mitochondrion	85.9	85.9
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	62.4	84.75
Os06t0486800-01	Rice	mitochondrion	82.25	83.78
Zm00001d045965_P001	Maize	mitochondrion	82.25	83.78
EER89775	Sorghum	mitochondrion	81.98	83.51
TraesCS7A01G232200.1	Wheat	golgi	81.98	83.29
TraesCS7B01G130600.1	Wheat	mitochondrion	81.98	83.29
TraesCS7D01G232300.1	Wheat	mitochondrion	81.98	83.29
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	81.72	83.02
Solyc02g086880.2.1	Tomato	plastid	81.2	81.63
PGSC0003DMT400001303	Potato	mitochondrion	81.2	81.63
AT5G14780.1	Thale cress	mitochondrion	81.2	80.99
CDY09885	Canola	mitochondrion	80.94	80.94
Bra008737.1-P	Field mustard	mitochondrion	80.68	80.47
CDX69558	Canola	mitochondrion	80.42	80.21
CDX85582	Canola	mitochondrion	80.16	80.16
Zm00001d053924_P001	Maize	cytosol	49.35	80.08
KRG93315	Soybean	mitochondrion	78.33	80.0
TraesCS4D01G007200.1	Wheat	golgi	78.07	79.73
Bra023487.1-P	Field mustard	mitochondrion	79.9	79.69
TraesCS6D01G255200.2	Wheat	mitochondrion	78.33	79.58
CDX91020	Canola	mitochondrion	79.63	79.43
TraesCS6B01G302400.2	Wheat	mitochondrion	78.07	79.31
Os06t0486900-01	Rice	mitochondrion	78.07	79.1
EES07384	Sorghum	mitochondrion	78.59	78.39
TraesCS4B01G066400.1	Wheat	mitochondrion	72.32	78.03
KRG93317	Soybean	nucleus	79.11	77.89
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	78.85	77.84
Zm00001d014163_P001	Maize	mitochondrion	48.56	76.86
Zm00001d017801_P001	Maize	mitochondrion	31.85	70.93
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	62.4	65.12
Zm00001d004323_P001	Maize	mitochondrion	24.54	64.83
TraesCS6A01G274900.1	Wheat	mitochondrion	63.45	64.46
Zm00001d019818_P001	Maize	mitochondrion	24.28	64.14
Zm00001d033618_P001	Maize	cytosol	61.88	61.56
GSMUA_Achr4P17980_001	Banana	cytosol	7.31	26.17
GSMUA_Achr3P21910_001	Banana	cytosol	22.19	24.93
GSMUA_Achr3P31530_001	Banana	cytosol	18.54	22.47
GSMUA_Achr3P03420_001	Banana	cytosol	18.54	22.47
GSMUA_Achr5P14420_001	Banana	cytosol	19.32	22.42
GSMUA_Achr5P14430_001	Banana	mitochondrion	17.23	21.71
GSMUA_Achr5P18940_001	Banana	cytosol	8.09	19.75
GSMUA_Achr5P18950_001	Banana	cytosol	10.97	18.67
GSMUA_Achr9P22790_001	Banana	plastid	21.15	15.43
GSMUA_Achr4P11440_001	Banana	plastid	20.1	13.53
GSMUA_Achr3P27990_001	Banana	plastid	21.67	13.5
GSMUA_Achr4P04100_001	Banana	plastid	20.1	13.28
GSMUA_Achr10P...	Banana	plastid	20.89	12.99

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0008150	GO:GO:0008152	GO:GO:0008863	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0016616	GO:GO:0042183	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G01200_001	EnsemblPlants:GSMUA_Achr3P01200_001
EnsemblPlants:GSMUA_Achr3T01200_001	UniProt:M0SAT8	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI00029520FB	:	:	:	:

Description

Formate dehydrogenase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G01200_001]

Coordinates

chr3:+:886395..890496

Molecular Weight (calculated)

42178.1 Da

IEP (calculated)

8.339

GRAVY (calculated)

-0.205

Length

383 amino acids

Sequence
(BLAST)

001: MAMLRAAKHA MRSLGSTAPD AAPFSRMLHA SPGSKKIVGV FYKANEYASL NPKFVGCVEG SLGIRDWLES QGHQYIVTDD KEGPNCELEK HIHDMHVLIT
101: TPFHPAYVTA ERIKRAKNLQ LLLTAGIGSD HIDLKAAAEA GLTVAEVTGS NVVSVAEDEL MRILILVRNF VPGYLQVIKG DWNVAGIAYR AYDLEGKTVG
201: TVGAGRIGKL LLQRLKPFNC NLLYYDRIKM EPALEKEIGA KFEEDLDTML PKCDIIVINT PLTEKTRGMF NKERIGKLKK GVLIVNNARG AIMDTQAVAD
301: ACSSGHIAGY SGDVWNPQPA PKDHPWRYMP NQAMTPHISG TTIDGQLRYA AGVKDMLDCY FKGQEFPAQN YIVKEGKLAS QYQ

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.