Factsheet for GSMUA_Achr5P18950_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G000640.1	Barley	cytosol	85.78	63.7
KXG29243	Sorghum	cytosol	87.11	51.44
Os02t0101500-02	Rice	extracellular, mitochondrion	86.22	50.26
TraesCS6D01G001700.1	Wheat	golgi, plastid	84.89	49.48
TraesCS6B01G004400.1	Wheat	peroxisome	84.89	49.48
TraesCS6A01G000400.1	Wheat	peroxisome	84.44	49.22
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	84.0	48.96
Solyc01g111630.2.1	Tomato	nucleus, plastid	83.11	48.45
PGSC0003DMT400015828	Potato	cytosol	82.67	48.19
KRH36064	Soybean	nucleus	82.22	47.93
KRG90684	Soybean	nucleus	82.22	47.93
Bra004275.1-P	Field mustard	cytosol	81.78	47.67
Bra004055.1-P	Field mustard	cytosol	81.33	47.41
CDY07405	Canola	cytosol	81.33	47.41
AT1G68010.2	Thale cress	cytosol	80.89	47.03
Zm00001d014919_P002	Maize	mitochondrion	89.33	46.53
CDY04198	Canola	cytosol	81.33	46.45
CDX96054	Canola	mitochondrion	82.22	40.39
CDY01876	Canola	endoplasmic reticulum, plasma membrane	81.33	26.41
GSMUA_Achr3P03420_001	Banana	cytosol	21.78	15.51
GSMUA_Achr3P31530_001	Banana	cytosol	21.33	15.19
GSMUA_Achr5P14430_001	Banana	mitochondrion	18.22	13.49
GSMUA_Achr5P14420_001	Banana	cytosol	18.22	12.42
GSMUA_Achr3P01200_001	Banana	mitochondrion	18.67	10.97
GSMUA_Achr3P21910_001	Banana	cytosol	16.44	10.85
GSMUA_Achr9P22790_001	Banana	plastid	22.67	9.71
GSMUA_Achr4P11440_001	Banana	plastid	23.56	9.31
GSMUA_Achr4P04100_001	Banana	plastid	23.11	8.97
GSMUA_Achr3P27990_001	Banana	plastid	23.11	8.46
GSMUA_Achr10P...	Banana	plastid	21.78	7.95
HORVU6Hr1G000650.2	Barley	peroxisome	2.67	3.11
HORVU6Hr1G017010.1	Barley	cytosol	0.0	0.0
GSMUA_Achr4P17980_001	Banana	cytosol	0.0	0.0
TraesCS5B01G226200.1	Wheat	cytosol	0.0	0.0
GSMUA_Achr5P18940_001	Banana	cytosol	0.0	0.0

Protein Annotations

MapMan:1.3.6	Gene3D:3.40.50.720	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G18950_001	EnsemblPlants:GSMUA_Achr5P18950_001	EnsemblPlants:GSMUA_Achr5T18950_001
UniProt:M0SZS4	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996
PANTHER:PTHR10996:SF137	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI0002968CA3	SEG:seg	:

Description

Glycerate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G18950_001]

Coordinates

chr5:-:20433111..20434729

Molecular Weight (calculated)

24585.9 Da

IEP (calculated)

8.772

GRAVY (calculated)

0.115

Length

225 amino acids

Sequence
(BLAST)

001: MAKPISIEVW NPSGKYRVVS TKSMPGTRWI RLLTDQDCRV EICTEKKTIL SVEDILALIG NRCDGVIGQA SRELLLTEDW GDVLFSALKR AGGSAFSNMA
101: VGYNNVDINA ANKYGIAVGN TPGVLTETTA ELAASLSLAA ARRIVEADQF MRAGLYDGWL PHLFVGNLLK GQTVGVIGAG RIGSAYARMM IEGFKMNLIY
201: YDLYQATRLE KFVTGMLSSS PLFFR

Best Arabidopsis Sequence Match ( AT1G68010.3 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LVCIFIPRKL ILIRFKMTKF

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.