Factsheet for Zm00001d014919_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18950_001	Banana	cytosol	46.53	89.33
KXG29243	Sorghum	cytosol	75.93	86.09
Os02t0101500-02	Rice	extracellular, mitochondrion	75.69	84.72
TraesCS6D01G001700.1	Wheat	golgi, plastid	74.54	83.42
TraesCS6B01G004400.1	Wheat	peroxisome	74.54	83.42
TraesCS6A01G000400.1	Wheat	peroxisome	74.31	83.16
HORVU6Hr1G017010.1	Barley	cytosol	19.44	78.5
Solyc01g111630.2.1	Tomato	nucleus, plastid	70.14	78.5
PGSC0003DMT400015828	Potato	cytosol	69.91	78.24
KRG90684	Soybean	nucleus	68.29	76.42
KRH36064	Soybean	nucleus	68.29	76.42
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	68.06	76.17
GSMUA_Achr5P18940_001	Banana	cytosol	27.08	74.52
AT1G68010.2	Thale cress	cytosol	66.67	74.42
Bra004275.1-P	Field mustard	cytosol	66.44	74.35
Bra004055.1-P	Field mustard	cytosol	65.97	73.83
CDY07405	Canola	cytosol	65.97	73.83
CDY04198	Canola	cytosol	65.74	72.08
HORVU6Hr1G000640.1	Barley	cytosol	49.07	69.97
HORVU6Hr1G000650.2	Barley	peroxisome	30.09	67.36
CDX96054	Canola	mitochondrion	67.36	63.54
TraesCS5B01G226200.1	Wheat	cytosol	19.44	62.22
CDY01876	Canola	endoplasmic reticulum, plasma membrane	66.67	41.56
Zm00001d030544_P001	Maize	cytosol, extracellular	21.06	28.44
Zm00001d024906_P001	Maize	cytosol	19.68	25.84
Zm00001d024907_P001	Maize	mitochondrion	19.91	25.52
Zm00001d018790_P001	Maize	extracellular, plasma membrane	18.06	24.92
Zm00001d014163_P001	Maize	mitochondrion	13.89	24.79
Zm00001d008883_P001	Maize	mitochondrion	18.75	24.55
Zm00001d004451_P001	Maize	cytosol	18.98	24.33
Zm00001d011368_P001	Maize	cytosol	15.51	23.18
Zm00001d011367_P001	Maize	cytosol	15.51	23.18
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	15.05	23.05
Zm00001d053924_P001	Maize	cytosol	12.04	22.03
Zm00001d045965_P001	Maize	mitochondrion	17.13	19.68
Zm00001d004323_P001	Maize	mitochondrion	6.02	17.93
Zm00001d019818_P001	Maize	mitochondrion	5.79	17.24
Zm00001d033618_P001	Maize	cytosol	14.81	16.62
Zm00001d026472_P001	Maize	plastid	23.38	16.5
Zm00001d005489_P006	Maize	mitochondrion	14.81	16.37
Zm00001d002051_P001	Maize	plastid	23.61	16.29
Zm00001d046923_P001	Maize	plastid	21.99	16.13
Zm00001d032114_P001	Maize	plastid	21.99	14.42
Zm00001d017801_P001	Maize	mitochondrion	5.32	13.37

Protein Annotations

MapMan:1.3.6	Gene3D:3.40.50.720	UniProt:A0A1D6GXQ6	ProteinID:AQK67589.1	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS1
InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065	PANTHER:PTHR10996	PANTHER:PTHR10996:SF137	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI000842D2CE	EnsemblPlantsGene:Zm00001d014919	EnsemblPlants:Zm00001d014919_P002	EnsemblPlants:Zm00001d014919_T002	SEG:seg

Description

Glycerate dehydrogenase HPR peroxisomal

Coordinates

chr5:-:68355566..68358484

Molecular Weight (calculated)

47264.2 Da

IEP (calculated)

8.306

GRAVY (calculated)

-0.061

Length

432 amino acids

Sequence
(BLAST)

001: MAKPVSIQVW NPSGKYRVVS TKSMPGTRWI RLLTDNDCRL EICTEHKTIL SVDDILALIG DRCDGVIGQL TEDWGDVLFS ALKRAGGTVF SNMAVGYNNV
101: DVEAANRNGI AIGNTPGVLT ETTAELAASL SLAAARRIVE ADQFMRAGLY DGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMIEGFKM NLIYYDLYQA
201: TRLENFVTGK QECYHMGSSS KQTVRSLSPG RGPPPWRMSS GRLTWSDSAI SLHPVLDKTT YHLINPERLA IMKKEAVLVN ASRGPVIDEA ALVEHLKANP
301: MFRVGLDVFE DEPYMKPGLA DMKNAVVVPH IASASKNLYI VAGGRPTDEM KCCLFFFSGH AREWQPCLLS TFLYGKIKGY PVWGNPNQVE PFLQENLTPP
401: PACPSIVNAK QIGWPAIGKA LGANTDRLVS TC

Best Arabidopsis Sequence Match ( AT1G68010.1 )
(BLAST)

001: MAKPVSIEVY NPNGKYRVVS TKPMPGTRWI NLLVDQGCRV EICHLKKTIL SVEDIIDLIG DKCDGVIGQL TEDWGETLFS ALSKAGGKAF SNMAVGYNNV
101: DVEAANKYGI AVGNTPGVLT ETTAELAASL SLAAARRIVE ADEFMRGGLY EGWLPHLFVG NLLKGQTVGV IGAGRIGSAY ARMMVEGFKM NLIYFDLYQS
201: TRLEKFVTAY GQFLKANGEQ PVTWKRASSM EEVLREADLI SLHPVLDKTT YHLVNKERLA MMKKEAILVN CSRGPVIDEA ALVEHLKENP MFRVGLDVFE
301: EEPFMKPGLA DTKNAIVVPH IASASKWTRE GMATLAALNV LGRVKGYPIW HDPNRVDPFL NENASPPNAS PSIVNSKALG LPVSKL

Arabidopsis Description

HPRhydroxypyruvate reductase [Source:TAIR;Acc:AT1G68010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.