Factsheet for Zm00001d005489_P006

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96197	Sorghum	mitochondrion	89.26	90.65
Os07t0263400-00	Rice	cytosol	56.78	78.17
Os07t0264100-01	Rice	mitochondrion	74.42	77.81
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	74.17	76.72
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	74.17	76.72
TraesCS5A01G161300.1	Wheat	plastid	74.17	76.72
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	74.17	72.86
TraesCS7B01G373500.1	Wheat	cytosol	19.18	72.12
GSMUA_Achr3P21910_001	Banana	cytosol	61.64	70.67
VIT_18s0041g01830.t01	Wine grape	cytosol	55.24	62.97
PGSC0003DMT400071027	Potato	cytosol	47.83	60.71
Solyc11g020060.1.1	Tomato	cytosol	43.22	60.14
AT1G72190.1	Thale cress	mitochondrion	52.94	55.5
CDX68275	Canola	mitochondrion	51.92	54.57
Bra003888.1-P	Field mustard	mitochondrion	51.92	54.57
CDY50445	Canola	mitochondrion	51.92	54.42
PGSC0003DMT400085920	Potato	mitochondrion	25.58	54.35
KRH62463	Soybean	mitochondrion	54.22	54.22
Solyc03g044670.1.1	Tomato	cytosol	29.16	47.5
Zm00001d053924_P001	Maize	cytosol	15.86	26.27
Zm00001d011367_P001	Maize	cytosol	19.18	25.95
Zm00001d011368_P001	Maize	cytosol	19.18	25.95
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	18.67	25.89
Zm00001d014163_P001	Maize	mitochondrion	15.6	25.21
Zm00001d004323_P001	Maize	mitochondrion	8.95	24.14
Zm00001d019818_P001	Maize	mitochondrion	8.7	23.45
Zm00001d024906_P001	Maize	cytosol	19.18	22.8
Zm00001d045965_P001	Maize	mitochondrion	21.74	22.61
Zm00001d008883_P001	Maize	mitochondrion	18.16	21.52
Zm00001d018790_P001	Maize	extracellular, plasma membrane	16.88	21.09
Zm00001d024907_P001	Maize	mitochondrion	17.65	20.47
Zm00001d030544_P001	Maize	cytosol, extracellular	16.62	20.31
Zm00001d033618_P001	Maize	cytosol	18.93	19.22
Zm00001d004451_P001	Maize	cytosol	16.11	18.69
Zm00001d026472_P001	Maize	plastid	26.34	16.83
Zm00001d002051_P001	Maize	plastid	26.85	16.77
Zm00001d046923_P001	Maize	plastid	23.02	15.28
Zm00001d014919_P002	Maize	mitochondrion	16.37	14.81
Zm00001d032114_P001	Maize	plastid	23.79	14.11
Zm00001d017801_P001	Maize	mitochondrion	5.37	12.21

Protein Annotations

EntrezGene:100217241	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1D6ENC3	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
ProteinID:ONM21305.1	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF2
SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI000843DC19	EnsemblPlantsGene:Zm00001d005489	EnsemblPlants:Zm00001d005489_P006	EnsemblPlants:Zm00001d005489_T006
SEG:seg	:	:	:	:	:

Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein

Coordinates

chr2:+:175795129..175802848

Molecular Weight (calculated)

42697.8 Da

IEP (calculated)

7.029

GRAVY (calculated)

0.020

Length

391 amino acids

Sequence
(BLAST)

001: MAGAIVGRLG RHPTSLLLLT LPRHAAAHHR LHSPSSSQGQ YSKMGDPSER NGHGALTRVL FCGPYWPAST NYTREYLQDY PFIQVDEVGL EQVPDVIHSY
101: HICVVKNKRI DSDIIAKATQ MKIIMQYGVG LEGVDVNAAT EHKIKVARIP GSTTGNAVSC AEMAIYLTLG ILRKQVCVVC LKEMDTAVNR KDLGVPVGDT
201: LFGKTILILG FGAIGIEVAK RLRPFGVKIL ATKRNWSSDT LPSYVDELVD KKGGPEDMYE FAGEANIVIA CMTLTSETVN ASLGIGIVDH KFVSSMKKGS
301: YLVNIARGRL LDYKAVFDHL ESGHLAGLGI DVAWMEPFDP EDPVLKFPNV ILTPHVAGVT EYSYRTMAKS VGDTALQLHL GEAFTEVEFV N

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.