CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g01830.t01	Wine grape	cytosol	61.89	70.55
Solyc11g020060.1.1	Tomato	cytosol	48.34	67.26
PGSC0003DMT400071027	Potato	cytosol	51.66	65.58
GSMUA_Achr3P21910_001	Banana	cytosol	54.73	62.76
CDY50445	Canola	mitochondrion	59.08	61.93
CDX68275	Canola	mitochondrion	58.82	61.83
Bra003888.1-P	Field mustard	mitochondrion	58.57	61.56
AT1G72190.1	Thale cress	mitochondrion	57.8	60.59
PGSC0003DMT400085920	Potato	mitochondrion	28.13	59.78
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	54.73	56.61
EER96197	Sorghum	mitochondrion	55.5	56.36
Os07t0263400-00	Rice	cytosol	40.92	56.34
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	54.22	56.08
TraesCS5A01G161300.1	Wheat	plastid	54.22	56.08
KXG34859	Sorghum	mitochondrion, plastid	54.48	55.47
Os07t0264100-01	Rice	mitochondrion	52.69	55.08
Zm00001d005489_P006	Maize	mitochondrion	54.22	54.22
TraesCS7B01G373500.1	Wheat	cytosol	14.32	53.85
Solyc03g044670.1.1	Tomato	cytosol	32.74	53.33
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	54.22	53.27
KRH44352	Soybean	peroxisome	12.79	32.68
KRH47286	Soybean	nucleus	21.23	26.52
KRH09880	Soybean	cytosol	19.44	25.08
KRH48312	Soybean	cytosol	20.72	24.04
KRH48313	Soybean	cytosol	19.69	22.92
KRH48310	Soybean	cytosol	19.44	22.75
KRG93315	Soybean	mitochondrion	21.23	22.13
KRH48311	Soybean	cytosol	18.41	21.56
KRH65202	Soybean	cytosol	12.28	21.33
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	20.97	21.13
KRG93317	Soybean	nucleus	20.97	21.08
KRH36064	Soybean	nucleus	19.95	20.21
KRG90684	Soybean	nucleus	19.44	19.69
KRH65201	Soybean	plastid	14.32	19.51
KRH35731	Soybean	nucleus	24.81	16.33
KRG91030	Soybean	endoplasmic reticulum	24.55	16.13
KRH44645	Soybean	nucleus	23.27	14.65
KRH23702	Soybean	extracellular	21.74	14.51
KRH47008	Soybean	endoplasmic reticulum	22.51	14.13

Protein Annotations

EntrezGene:100785085	Gene3D:3.40.50.720	MapMan:35.1	EMBL:ACUP02002295	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_NAD-bd	EnsemblPlantsGene:GLYMA_04G110700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114
UniProt:K7KJD2	ProteinID:KRH62462.1	EnsemblPlants:KRH62463	ProteinID:KRH62463	ProteinID:KRH62463.1	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF2	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI0002339ACA	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:12206029..12221810

Molecular Weight (calculated)

43425.9 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.087

Length

391 amino acids

Sequence
(BLAST)

001: MLRGLFVFGG TCCRRLTLAR QSTQKQKQWW DHLHHHLRSK NLHWAGLMES NGNSVKDAEK QITRVLFCGP RFPASHEYTI EYLQNHSHIK VDVLPLEDVP
101: KDIANYHVCI VKNMRLDSEI ISRAVQMQLI MQYGVGLEGV DIDAATKHGI KVARIPGDVS GNSASCAEMA IYLMLGLLRK QNELQVSIQQ KKLGEPITET
201: LLGKTIFILG FGNIGMDLAK RLQPFGVKVI AIKRSWASYA QHASKLSRND AEDLVDVKGS HEDIYEFARK ADIVVCCLTL NRETVGIINN KFISSMKKGG
301: LLVNVARGGL VDYEAVINHL ESGHLGGLGT DVAWTEPFNP DDQIFKFKNV IMTPHVAGVT EHSYRSMAKA VGDVVLQLHA GLPLTGIELV N

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.