CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0263400-00	Rice	cytosol	57.55	77.82
Os07t0264100-01	Rice	mitochondrion	75.52	77.54
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	75.78	76.98
TraesCS5D01G166200.2	Wheat	mitochondrion, plastid	75.52	76.72
TraesCS5A01G161300.1	Wheat	plastid	75.26	76.45
EER96197	Sorghum	mitochondrion	76.04	75.84
TraesCS7B01G373500.1	Wheat	cytosol	20.05	74.04
HORVU5Hr1G050350.1	Barley	mitochondrion, plastid	75.26	72.61
GSMUA_Achr3P21910_001	Banana	cytosol	62.76	70.67
Solyc11g020060.1.1	Tomato	cytosol	46.35	63.35
PGSC0003DMT400071027	Potato	cytosol	50.26	62.66
VIT_18s0041g01830.t01	Wine grape	cytosol	54.43	60.93
PGSC0003DMT400085920	Potato	mitochondrion	28.12	58.7
AT1G72190.1	Thale cress	mitochondrion	55.73	57.37
CDX68275	Canola	mitochondrion	54.17	55.91
Bra003888.1-P	Field mustard	mitochondrion	53.91	55.65
CDY50445	Canola	mitochondrion	53.91	55.5
KRH62463	Soybean	mitochondrion	55.47	54.48
Solyc03g044670.1.1	Tomato	cytosol	29.95	47.92
EES11740	Sorghum	mitochondrion	20.57	23.94
OQU81061	Sorghum	plastid	19.27	23.2
OQU81058	Sorghum	cytosol	20.05	22.99
OQU88433	Sorghum	cytosol	19.01	22.74
KXG31500	Sorghum	cytosol	18.49	22.54
EES11738	Sorghum	cytosol	19.27	21.89
EES10352	Sorghum	cytosol, mitochondrion	19.01	21.6
EES10400	Sorghum	cytosol	18.75	21.3
EER89775	Sorghum	mitochondrion	20.83	21.28
EES07384	Sorghum	mitochondrion	20.57	20.57
KXG29243	Sorghum	cytosol	17.97	18.11
EES12983	Sorghum	plastid	25.52	15.81
EER90146	Sorghum	mitochondrion, plastid	23.44	14.68
EES15079	Sorghum	plastid	22.92	14.22

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1B6QAA7	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_NAD-bd
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016616	GO:GO:0051287	GO:GO:0055114	EnsemblPlants:KXG34859	ProteinID:KXG34859
ProteinID:KXG34859.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00671	PANTHER:PTHR42938
PANTHER:PTHR42938:SF2	EnsemblPlantsGene:SORBI_3002G101400	SUPFAM:SSF51735	SUPFAM:SSF52283	UniParc:UPI00081AC7AC	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:11459783..11464030

Molecular Weight (calculated)

41309.2 Da

IEP (calculated)

7.040

GRAVY (calculated)

0.096

Length

384 amino acids

Sequence
(BLAST)

001: MAGARLAARP ATHAPAHQLP RAAAFAAAGR RGGDSPFFPR ARGSVLTVAC AIKSNGSNSK VTRVLFCGPY FPASTRYTTE YLQDYPFIEV DEVGLEQVPD
101: VIHNYHICVV KNRRIDSDVI AKATQMKIIM QYGVGLEGVD VNTATEHKIK VARIPGSMTG NAVSCAEMAI YLTLGVLRKQ KLMDAAVHQK DLGSPTGETI
201: LGKTVLILGF GAIGMEIAKR LKPFGVKILA TKRNWSLGSL PCDVDGLVDK KGGPEDMYEL AGEADIVITC LLQTNETVGI VDDMFLSAMK KGSCLVNIAR
301: GGLLDYKAVF DHLESGHLGG LGIDVAWTEP FDPEDPILKF SNVIITPHVA GVTEYSYRTM AKVVGDVALQ LHSGEIFTGI EFVN

Best Arabidopsis Sequence Match ( AT1G72190.1 )
(BLAST)

001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN

Arabidopsis Description

D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.