Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g020060.1.1 | Tomato | cytosol | 56.85 | 69.39 |
| PGSC0003DMT400071027 | Potato | cytosol | 61.81 | 68.83 |
| GSMUA_Achr3P21910_001 | Banana | cytosol | 65.6 | 65.98 |
| KRH62463 | Soybean | mitochondrion | 70.55 | 61.89 |
| CDY50445 | Canola | mitochondrion | 65.89 | 60.59 |
| AT1G72190.1 | Thale cress | mitochondrion | 65.89 | 60.59 |
| CDX68275 | Canola | mitochondrion | 65.31 | 60.22 |
| Bra003888.1-P | Field mustard | mitochondrion | 65.01 | 59.95 |
| PGSC0003DMT400085920 | Potato | mitochondrion | 31.78 | 59.24 |
| Os07t0263400-00 | Rice | cytosol | 48.69 | 58.8 |
| Os07t0264100-01 | Rice | mitochondrion | 61.81 | 56.68 |
| Solyc03g044670.1.1 | Tomato | cytosol | 39.65 | 56.67 |
| EER96197 | Sorghum | mitochondrion | 63.27 | 56.36 |
| TraesCS5B01G158700.2 | Wheat | mitochondrion, plastid | 61.52 | 55.82 |
| TraesCS5D01G166200.2 | Wheat | mitochondrion, plastid | 61.22 | 55.56 |
| TraesCS5A01G161300.1 | Wheat | plastid | 60.93 | 55.29 |
| Zm00001d005489_P006 | Maize | mitochondrion | 62.97 | 55.24 |
| KXG34859 | Sorghum | mitochondrion, plastid | 60.93 | 54.43 |
| TraesCS7B01G373500.1 | Wheat | cytosol | 16.04 | 52.88 |
| HORVU5Hr1G050350.1 | Barley | mitochondrion, plastid | 60.06 | 51.76 |
| VIT_09s0002g04300.t01 | Wine grape | cytosol | 21.87 | 23.96 |
| VIT_02s0025g04730.t01 | Wine grape | cytosol | 21.87 | 23.66 |
| VIT_02s0025g04750.t01 | Wine grape | cytosol, plasma membrane | 19.53 | 23.1 |
| VIT_09s0002g04290.t01 | Wine grape | cytosol, plastid | 20.41 | 22.36 |
| VIT_14s0066g01320.t01 | Wine grape | mitochondrion | 23.03 | 20.63 |
| VIT_03s0038g02510.t01 | Wine grape | cytosol, peroxisome, plastid | 20.7 | 18.39 |
| VIT_15s0048g01330.t01 | Wine grape | mitochondrion, peroxisome, plastid | 20.99 | 15.62 |
| VIT_18s0001g09890.t01 | Wine grape | plastid | 25.66 | 14.55 |
| VIT_09s0018g01870.t01 | Wine grape | plastid | 26.24 | 14.42 |
| VIT_03s0180g00130.t01 | Wine grape | cytosol | 25.95 | 13.63 |
Protein Annotations
| EntrezGene:100258500 | wikigene:100258500 | Gene3D:3.40.50.720 | MapMan:35.1 | ProteinID:CBI39250 | ProteinID:CBI39250.3 |
| InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_CS | InterPro:D-isomer_DH_NAD-bd | UniProt:D7U936 | EMBL:FN596744 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0016616 | GO:GO:0051287 | GO:GO:0055114 | EntrezGene:LOC100258500 | wikigene:LOC100258500 | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF00389 | PFAM:PF02826 | ScanProsite:PS00671 | PANTHER:PTHR42938 | PANTHER:PTHR42938:SF2 | SUPFAM:SSF51735 |
| SUPFAM:SSF52283 | TIGR:TC63801 | UniParc:UPI0001BE4EA4 | ArrayExpress:VIT_18s0041g01830 | EnsemblPlantsGene:VIT_18s0041g01830 | EnsemblPlants:VIT_18s0041g01830.t01 |
| unigene:Vvi.45 | RefSeq:XP_002282092 | RefSeq:XP_002282092.1 | RefSeq:XP_003634565 | RefSeq:XP_003634565.1 | RefSeq:XP_010665339.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:26773203..26795521
Molecular Weight (calculated)
37373.2 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.001
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKDSNGCIT RLLFCGPNFP ASNKYTREYL QNYPFIQVDD SSFEDVPDVI ADYDMCIVKS MRLDSNIISR ANKMKLIMQF GVGLEGVDIN AATKCGIKVA
101: RIASGETGNA ASCAEMAIYL MLGLLRKQKE MQISLKQKIV GEPIGDTLFG KTVFIMGFGN IGIDLAKRLR PFGVRILATK RSWASQSLNS SQSNGFPTPN
201: DNADELVDEK GGHEAIYDFA SSADIVVCCL RLNSETAAII DKKFISSMRK GGLLINIARG GLMDYEAVAY HLESGHLGGL GTDVTWTEPF NPDDQILKFQ
301: NVIVTPHVAG VTEHSYRSMA KVVGDIALQL HAGAPLTGLE FVN
101: RIASGETGNA ASCAEMAIYL MLGLLRKQKE MQISLKQKIV GEPIGDTLFG KTVFIMGFGN IGIDLAKRLR PFGVRILATK RSWASQSLNS SQSNGFPTPN
201: DNADELVDEK GGHEAIYDFA SSADIVVCCL RLNSETAAII DKKFISSMRK GGLLINIARG GLMDYEAVAY HLESGHLGGL GTDVTWTEPF NPDDQILKFQ
301: NVIVTPHVAG VTEHSYRSMA KVVGDIALQL HAGAPLTGLE FVN
001: MTIMFKIAKA TLRSRNSSVA SLFYSIQARS ISRQSKVVKI ERIVEKEDMH VTRVLFCGPH FPDSYNFTRE YLQPYPFIKV DVVHYRDVPE VIKNYHICVA
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN
101: MTMQMDSNVI SRASNIKLIM QYGVGLDGVD IDAATKHGIK VARIPSEGTG NAASCSEMAI YLMLGLLKKQ NEMQISLRNR LLGEPTGDTL LGKTVFILGY
201: GNIGIELAKR LKPFGSRVIA TKRFWPASIV DSDSRLVDEK GSHEDIYTFA GKADIVVVCL RLNKETAEIV NKEFICSMKK GALLVNIARG GLINYESAFQ
301: NLESGHLGGL GIDVAWSEPF DPNDPILKFK NVIITPHVAG VTEYSYRSMA KIVGDLALQL HEGLPLTGIE FVN
Arabidopsis Description
D-isomer specific 2-hydroxyacid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBQ3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.