Factsheet for VIT_14s0066g01320.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g086880.2.1	Tomato	plastid	87.73	88.19
PGSC0003DMT400001303	Potato	mitochondrion	87.47	87.93
Zm00001d011368_P001	Maize	cytosol	66.06	87.54
Zm00001d011367_P001	Maize	cytosol	66.06	87.54
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	63.45	86.17
GSMUA_Achr3P01200_001	Banana	mitochondrion	85.9	85.9
EER89775	Sorghum	mitochondrion	83.81	85.37
Zm00001d045965_P001	Maize	mitochondrion	83.55	85.11
Os06t0486800-01	Rice	mitochondrion	83.29	84.84
TraesCS7A01G232200.1	Wheat	golgi	82.77	84.08
TraesCS7B01G130600.1	Wheat	mitochondrion	82.77	84.08
TraesCS7D01G232300.1	Wheat	mitochondrion	82.77	84.08
KRG93315	Soybean	mitochondrion	81.72	83.47
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	81.98	83.29
AT5G14780.1	Thale cress	mitochondrion	82.25	82.03
Os06t0486900-01	Rice	mitochondrion	80.68	81.75
TraesCS4D01G007200.1	Wheat	golgi	79.9	81.6
CDX69558	Canola	mitochondrion	81.72	81.51
CDY09885	Canola	mitochondrion	81.46	81.46
CDX85582	Canola	mitochondrion	81.46	81.46
Bra008737.1-P	Field mustard	mitochondrion	81.46	81.25
Bra023487.1-P	Field mustard	mitochondrion	81.2	80.99
TraesCS6D01G255200.2	Wheat	mitochondrion	79.37	80.64
Zm00001d053924_P001	Maize	cytosol	49.61	80.51
TraesCS4B01G066400.1	Wheat	mitochondrion	74.15	80.0
KRG93317	Soybean	nucleus	81.2	79.95
CDX91020	Canola	mitochondrion	80.16	79.95
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	80.94	79.9
TraesCS6B01G302400.2	Wheat	mitochondrion	78.59	79.84
EES07384	Sorghum	mitochondrion	79.37	79.17
Zm00001d014163_P001	Maize	mitochondrion	49.35	78.1
Zm00001d004323_P001	Maize	mitochondrion	25.59	67.59
Zm00001d017801_P001	Maize	mitochondrion	30.29	67.44
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	64.49	67.3
Zm00001d019818_P001	Maize	mitochondrion	25.07	66.21
TraesCS6A01G274900.1	Wheat	mitochondrion	64.49	65.52
Zm00001d033618_P001	Maize	cytosol	61.88	61.56
VIT_02s0025g04730.t01	Wine grape	cytosol	19.32	23.34
VIT_18s0041g01830.t01	Wine grape	cytosol	20.63	23.03
VIT_09s0002g04290.t01	Wine grape	cytosol, plastid	18.54	22.68
VIT_09s0002g04300.t01	Wine grape	cytosol	18.28	22.36
VIT_02s0025g04750.t01	Wine grape	cytosol, plasma membrane	15.93	21.03
VIT_03s0038g02510.t01	Wine grape	cytosol, peroxisome, plastid	18.28	18.13
VIT_15s0048g01330.t01	Wine grape	mitochondrion, peroxisome, plastid	20.89	17.35
VIT_09s0018g01870.t01	Wine grape	plastid	22.45	13.78
VIT_18s0001g09890.t01	Wine grape	plastid	21.15	13.39
VIT_03s0180g00130.t01	Wine grape	cytosol	22.19	13.02

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	EntrezGene:100261093	wikigene:100261093	Gene3D:3.40.50.720	MapMan:50.1.16
EMBL:AM429924	ProteinID:CAN71454	ProteinID:CAN71454.1	ProteinID:CBI34929	ProteinID:CBI34929.3	InterPro:D-isomer_2_OHA_DH_cat_dom
InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	UniProt:D7TWQ4	InterPro:FDH_NAD-dep	EMBL:FN596252
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008863
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0042183	GO:GO:0051287
GO:GO:0055114	EntrezGene:LOC100261093	wikigene:LOC100261093	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389
PFAM:PF02826	ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1
SUPFAM:SSF51735	SUPFAM:SSF52283	TIGR:TC55752	TIGR:TC62456	UniParc:UPI0001984C48	ArrayExpress:VIT_14s0066g01320
EnsemblPlantsGene:VIT_14s0066g01320	EnsemblPlants:VIT_14s0066g01320.t01	unigene:Vvi.7905	RefSeq:XP_002278444	RefSeq:XP_002278444.1	SEG:seg

Description

Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:D7TWQ4]

Coordinates

chr14:+:27776142..27779816

Molecular Weight (calculated)

42054.8 Da

IEP (calculated)

7.428

GRAVY (calculated)

-0.156

Length

383 amino acids

Sequence
(BLAST)

001: MAMMKRVAES AVRAFALGST SGALTKHLHA SAGSKKIVGV FYKANEYAAM NPNFVGCVEG ALGIRDWLES QGHQYIVTDD KEGPDCELEK HIPDLHVLIS
101: TPFHPAYVTA ERIKKAKNLQ LLLTAGIGSD HIDLKAAAAA GLTVAEVTGS NVVSVAEDEL MRILILVRNF LPGHHQVISG EWNVAGIAYR AYDLEGKTVG
201: TVGAGRIGRL LLQRLKPFNC NLLYHDRIKM DPELENQIGA KFEEDVDVML PKCDIIVINM PLTEKTKGMF NKERIAKLKK GVLIVNNARG AIMDTQAVAD
301: ACSSGHIAGY SGDVWYPQPA PKDHPWRYMP NQAMTPHISG TTIDAQLRYA AGVKDMLDRY FKGEDFPAQH YIVKEGQLAS QYQ

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.