Factsheet for Bra008737.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69558	Canola	mitochondrion	99.48	99.48
CDY09885	Canola	mitochondrion	98.7	98.96
Bra023487.1-P	Field mustard	mitochondrion	92.45	92.45
AT5G14780.1	Thale cress	mitochondrion	91.93	91.93
Zm00001d011367_P001	Maize	cytosol	62.5	83.05
Zm00001d011368_P001	Maize	cytosol	62.5	83.05
Solyc02g086880.2.1	Tomato	plastid	82.29	82.94
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	60.68	82.62
VIT_14s0066g01320.t01	Wine grape	mitochondrion	81.25	81.46
TraesCS7D01G232300.1	Wheat	mitochondrion	79.95	81.43
TraesCS7B01G130600.1	Wheat	mitochondrion	79.95	81.43
TraesCS7A01G232200.1	Wheat	golgi	79.95	81.43
Zm00001d045965_P001	Maize	mitochondrion	79.69	81.38
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	79.69	81.17
Os06t0486800-01	Rice	mitochondrion	79.43	81.12
EER89775	Sorghum	mitochondrion	79.43	81.12
GSMUA_Achr3P01200_001	Banana	mitochondrion	80.47	80.68
Zm00001d053924_P001	Maize	cytosol	47.92	77.97
KRG93315	Soybean	mitochondrion	75.78	77.6
Os06t0486900-01	Rice	mitochondrion	76.3	77.51
TraesCS4D01G007200.1	Wheat	golgi	75.26	77.07
TraesCS6B01G302400.2	Wheat	mitochondrion	75.52	76.92
TraesCS6D01G255200.2	Wheat	mitochondrion	75.52	76.92
KRG93317	Soybean	nucleus	77.08	76.09
TraesCS4B01G066400.1	Wheat	mitochondrion	70.31	76.06
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.3	75.52
EES07384	Sorghum	mitochondrion	75.0	75.0
Zm00001d014163_P001	Maize	mitochondrion	46.61	73.97
Zm00001d017801_P001	Maize	mitochondrion	28.91	64.53
TraesCS5D01G389600.1	Wheat	extracellular, mitochondrion	60.68	63.49
TraesCS6A01G274900.1	Wheat	mitochondrion	60.68	61.8
Zm00001d004323_P001	Maize	mitochondrion	22.66	60.0
PGSC0003DMT400068907	Potato	cytosol	23.44	59.6
Zm00001d019818_P001	Maize	mitochondrion	22.4	59.31
Zm00001d033618_P001	Maize	cytosol	59.38	59.22
Bra003537.1-P	Field mustard	cytosol	20.05	24.6
Bra035206.1-P	Field mustard	cytosol	19.01	23.55
Bra026966.1-P	Field mustard	cytosol	14.58	23.43
Bra003888.1-P	Field mustard	mitochondrion	22.14	22.85
Bra019774.1-P	Field mustard	cytosol	20.31	22.61
Bra035498.1-P	Field mustard	cytosol	4.95	19.39
Bra004275.1-P	Field mustard	cytosol	19.01	18.91
Bra004055.1-P	Field mustard	cytosol	19.01	18.91
Bra026967.1-P	Field mustard	cytosol, nucleus, plastid	15.89	15.37
Bra034616.1-P	Field mustard	plastid	23.44	14.97
Bra017637.1-P	Field mustard	plastid	22.4	14.38
Bra016589.1-P	Field mustard	plastid	22.92	14.17
Bra011506.1-P	Field mustard	plastid	22.92	14.17
Bra001747.1-P	Field mustard	plastid	20.31	13.29
Bra034615.1-P	Field mustard	cytosol	1.04	2.34

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	EnsemblPlantsGene:Bra008737	EnsemblPlants:Bra008737.1
EnsemblPlants:Bra008737.1-P	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS	InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	InterPro:FDH_NAD-dep
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0008863
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0016616	GO:GO:0042183	GO:GO:0051287
GO:GO:0055114	UniProt:M4CWZ0	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826
ScanProsite:PS00065	ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735
SUPFAM:SSF52283	UniParc:UPI000254519E	SEG:seg	:	:	:

Description

AT5G14780 (E=6e-204) FDH | FDH (FORMATE DEHYDROGENASE); NAD or NADH binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor

Coordinates

chrA10:-:13634601..13636599

Molecular Weight (calculated)

42327.9 Da

IEP (calculated)

8.195

GRAVY (calculated)

-0.284

Length

384 amino acids

Sequence
(BLAST)

001: MAMRRVTRAA IRASCVSSSS SGYFARKFNA SSGDSKKIVG VFYKANEYAS KNPNFLGCVE NALGIRNWLE SQGHHYIVTD DKEGPNCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL QLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVN GEWNVAGIAY RAYDLEGKTV
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MGPEMEKETG AKYVESLDEM LPKCDVVVVN TPLTEKTRGM FNKEMIGKMK KGVLIVNNAR GAIMDRQAVV
301: EAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHIS GTTIDAQLRY AAGTKDMLEK YFKGEDFPAQ NYIVKDGELA PQYR

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.