Factsheet for TraesCS7B01G130600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 21043471
golgi: 23128297
mitochondrion: 23895732
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 21043471 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.

msms PMID: 23895732 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G232300.1	Wheat	mitochondrion	100.0	100.0
TraesCS7A01G232200.1	Wheat	golgi	99.73	99.73
HORVU7Hr1G047700.3	Barley	mitochondrion, plasma membrane	98.94	98.94
Zm00001d011368_P001	Maize	cytosol	72.68	94.81
Zm00001d011367_P001	Maize	cytosol	72.68	94.81
EER89775	Sorghum	mitochondrion	94.16	94.41
Zm00001d006877_P001	Maize	cytosol, mitochondrion, plastid	70.56	94.33
Zm00001d045965_P001	Maize	mitochondrion	93.9	94.15
Os06t0486800-01	Rice	mitochondrion	93.63	93.88
Zm00001d053924_P001	Maize	cytosol	55.7	88.98
TraesCS4B01G066400.1	Wheat	mitochondrion	83.02	88.17
Zm00001d014163_P001	Maize	mitochondrion	54.11	84.3
VIT_14s0066g01320.t01	Wine grape	mitochondrion	84.08	82.77
GSMUA_Achr3P01200_001	Banana	mitochondrion	83.29	81.98
KRG93315	Soybean	mitochondrion	81.43	81.87
PGSC0003DMT400001303	Potato	mitochondrion	81.43	80.58
Solyc02g086880.2.1	Tomato	plastid	81.43	80.58
CDY09885	Canola	mitochondrion	81.43	80.16
TraesCS6B01G302400.2	Wheat	mitochondrion	80.11	80.11
Bra008737.1-P	Field mustard	mitochondrion	81.43	79.95
AT5G14780.1	Thale cress	mitochondrion	81.43	79.95
KRH20294	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	82.23	79.9
KRG93317	Soybean	nucleus	82.23	79.69
CDX69558	Canola	mitochondrion	81.17	79.69
Bra023487.1-P	Field mustard	mitochondrion	79.84	78.39
CDX85582	Canola	mitochondrion	79.31	78.07
CDX91020	Canola	mitochondrion	78.51	77.08
Zm00001d004323_P001	Maize	mitochondrion	26.26	68.28
Zm00001d033618_P001	Maize	cytosol	68.17	66.75
Zm00001d019818_P001	Maize	mitochondrion	25.46	66.21
Zm00001d017801_P001	Maize	mitochondrion	29.71	65.12
TraesCS2B01G048100.1	Wheat	plastid	22.02	24.13
TraesCS7B01G456600.1	Wheat	cytosol, plastid	21.22	23.26
TraesCS2B01G048000.1	Wheat	mitochondrion	19.89	23.15
TraesCS2B01G047900.1	Wheat	cytosol, peroxisome, plastid	19.36	23.1
TraesCS1B01G004500.1	Wheat	extracellular, golgi, mitochondrion	19.36	22.6
TraesCS3B01G180100.1	Wheat	cytosol, golgi, unclear	18.57	22.15
TraesCS2B01G048500.1	Wheat	cytosol	19.63	21.96
TraesCS4B01G324200.1	Wheat	peroxisome	18.04	21.52
TraesCS5B01G226200.1	Wheat	cytosol	7.69	21.48
TraesCS7B01G373500.1	Wheat	cytosol	5.57	20.19
TraesCS6B01G004400.1	Wheat	peroxisome	19.89	19.43
TraesCS5B01G158700.2	Wheat	mitochondrion, plastid	19.36	19.31
TraesCS7B01G400800.1	Wheat	plastid	22.81	14.08
TraesCS1B01G234300.2	Wheat	plastid	22.55	13.73

Protein Annotations

KEGG:00630+1.17.1.9	KEGG:00680+1.17.1.9	Gene3D:3.40.50.720	MapMan:50.1.16	InterPro:D-isomer_2_OHA_DH_cat_dom	InterPro:D-isomer_DH_CS
InterPro:D-isomer_DH_CS1	InterPro:D-isomer_DH_NAD-bd	InterPro:FDH_NAD-dep	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008863	GO:GO:0016616	GO:GO:0051287
GO:GO:0055114	HAMAP:MF_03210	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00389	PFAM:PF02826	ScanProsite:PS00065
ScanProsite:PS00670	ScanProsite:PS00671	PANTHER:PTHR42938	PANTHER:PTHR42938:SF1	SUPFAM:SSF51735	SUPFAM:SSF52283
EnsemblPlantsGene:TraesCS7B01G130600	EnsemblPlants:TraesCS7B01G130600.1	TIGR:cd05302	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:157216864..157219565

Molecular Weight (calculated)

41382.8 Da

IEP (calculated)

6.997

GRAVY (calculated)

-0.221

Length

377 amino acids

Sequence
(BLAST)

001: MAAMCRAAAR QLVDRAVGSR AAHTSAGSKK IVGVFYQAGE YADKNPNFVG CVEGALGIRD WLESKGHHYI VTDDKEGLNS ELEKHIEDMH VLITTPFHPA
101: YVTAERIKKA KNLELLLTAG IGSDHIDLPA AAAAGLTVAE VTGSNTVSVA EDELMRILIL LRNFLPGYQQ VVKGEWNVAG IAHRAYDLEG KTVGTVGAGR
201: IGRLLLQRLK PFNCNLLYHD RLQINPELEK EIGAKFEEDL DAMLPKCDVI VINTPLTEKT RGMFNKEKIA KMKKGVIIVN NARGAIMDTQ AVADACSSGH
301: IAGYGGDVWF PQPAPKDHPW RYMPNHAMTP HISGTTIDAQ LRYAAGVKDM LDRYFKGEDF PAENYIVKEG ELASQYK

Best Arabidopsis Sequence Match ( AT5G14780.1 )
(BLAST)

001: MAMRQAAKAT IRACSSSSSS GYFARRQFNA SSGDSKKIVG VFYKANEYAT KNPNFLGCVE NALGIRDWLE SQGHQYIVTD DKEGPDCELE KHIPDLHVLI
101: STPFHPAYVT AERIKKAKNL KLLLTAGIGS DHIDLQAAAA AGLTVAEVTG SNVVSVAEDE LMRILILMRN FVPGYNQVVK GEWNVAGIAY RAYDLEGKTI
201: GTVGAGRIGK LLLQRLKPFG CNLLYHDRLQ MAPELEKETG AKFVEDLNEM LPKCDVIVIN MPLTEKTRGM FNKELIGKLK KGVLIVNNAR GAIMERQAVV
301: DAVESGHIGG YSGDVWDPQP APKDHPWRYM PNQAMTPHTS GTTIDAQLRY AAGTKDMLER YFKGEDFPTE NYIVKDGELA PQYR

Arabidopsis Description

FDH1Formate dehydrogenase, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UHK7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.