Subcellular Localization
min:
: max
Winner_takes_all: golgi, unclear, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G153500.1 | Wheat | peroxisome | 98.1 | 97.48 |
| TraesCS3D01G160800.1 | Wheat | cytosol | 97.78 | 97.17 |
| TraesCS4B01G324200.1 | Wheat | peroxisome | 91.77 | 91.77 |
| KXG31500 | Sorghum | cytosol | 86.08 | 86.35 |
| Os01t0228600-01 | Rice | extracellular | 82.59 | 82.59 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 76.27 | 75.31 |
| GSMUA_Achr3P03420_001 | Banana | cytosol | 75.0 | 75.0 |
| Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 72.47 | 73.16 |
| VIT_09s0002g04300.t01 | Wine grape | cytosol | 70.57 | 71.25 |
| KRH47286 | Soybean | nucleus | 70.25 | 70.93 |
| PGSC0003DMT400019584 | Potato | cytosol | 68.99 | 69.65 |
| AT1G79870.1 | Thale cress | cytosol | 68.67 | 69.33 |
| Solyc12g044260.1.1 | Tomato | cytosol | 68.35 | 69.01 |
| CDX79406 | Canola | cytosol | 68.04 | 68.69 |
| CDX87280 | Canola | cytosol | 66.77 | 68.06 |
| Bra035206.1-P | Field mustard | cytosol | 66.77 | 68.06 |
| Bra003537.1-P | Field mustard | cytosol | 67.41 | 68.05 |
| CDX67931 | Canola | cytosol | 67.41 | 68.05 |
| GSMUA_Achr3P31530_001 | Banana | cytosol | 68.04 | 68.04 |
| KRH44352 | Soybean | peroxisome | 32.28 | 66.67 |
| CDY58781 | Canola | cytosol | 65.82 | 66.45 |
| Solyc12g044250.1.1 | Tomato | vacuole | 66.14 | 66.35 |
| PGSC0003DMT400019586 | Potato | extracellular | 64.56 | 64.76 |
| HORVU3Hr1G031200.3 | Barley | cytosol, mitochondrion | 98.42 | 63.99 |
| Solyc03g120680.2.1 | Tomato | nucleus | 60.13 | 61.09 |
| VIT_09s0002g04290.t01 | Wine grape | cytosol, plastid | 59.49 | 60.06 |
| KRH09880 | Soybean | cytosol | 56.96 | 59.41 |
| TraesCS2B01G048000.1 | Wheat | mitochondrion | 49.37 | 48.15 |
| TraesCS2B01G047900.1 | Wheat | cytosol, peroxisome, plastid | 47.78 | 47.78 |
| TraesCS1B01G004500.1 | Wheat | extracellular, golgi, mitochondrion | 46.84 | 45.82 |
| TraesCS2B01G048500.1 | Wheat | cytosol | 48.1 | 45.1 |
| TraesCS7B01G456600.1 | Wheat | cytosol, plastid | 48.42 | 44.48 |
| TraesCS2B01G048100.1 | Wheat | plastid | 48.42 | 44.48 |
| TraesCS5B01G226200.1 | Wheat | cytosol | 12.66 | 29.63 |
| TraesCS6B01G004400.1 | Wheat | peroxisome | 30.06 | 24.61 |
| TraesCS7B01G373500.1 | Wheat | cytosol | 7.28 | 22.12 |
| TraesCS5B01G158700.2 | Wheat | mitochondrion, plastid | 23.42 | 19.58 |
| TraesCS7B01G130600.1 | Wheat | mitochondrion | 22.15 | 18.57 |
| TraesCS4B01G066400.1 | Wheat | mitochondrion | 20.57 | 18.31 |
| TraesCS6B01G302400.2 | Wheat | mitochondrion | 21.52 | 18.04 |
| TraesCS7B01G400800.1 | Wheat | plastid | 29.43 | 15.22 |
| TraesCS1B01G234300.2 | Wheat | plastid | 29.11 | 14.86 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016616 | GO:GO:0051287 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00389 | PFAM:PF02826 | PANTHER:PTHR10996 | PANTHER:PTHR10996:SF139 |
| SUPFAM:SSF51735 | SUPFAM:SSF52283 | EnsemblPlantsGene:TraesCS3B01G180100 | EnsemblPlants:TraesCS3B01G180100.1 | TIGR:cd12156 | SEG:seg |
Description
No Description!
Coordinates
chr3B:-:187806328..187810705
Molecular Weight (calculated)
34452.6 Da
IEP (calculated)
5.692
GRAVY (calculated)
0.057
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLGVLLLH PMNAYLEQEL DRRFRLFRFW DSPPDGRAEF LRANASAIRA VVGNAGYNAD AALIDALPSL EIVASFSVGI DRVDLPKCRE RGIRVTNTPD
101: VLTDDVADLA VGLAIAALRK IPQADRYVRA GLWKAKGDYT LTARFSGKRV GIIGLGRIGL AIATRVEAFD CPVNYYQRTK KDYPNYTYYP SVVELAANSD
201: ILVVACPLNE QTRHIVNREV IEVLGPKGVL INIGRGPHVD EPELVSALVE GRLGGAGLDV FEDEPNVPEA LFALDNVVLV PHVGSGTHET RQAMADLVLG
301: NLEAHVLKKP LLTPVV
101: VLTDDVADLA VGLAIAALRK IPQADRYVRA GLWKAKGDYT LTARFSGKRV GIIGLGRIGL AIATRVEAFD CPVNYYQRTK KDYPNYTYYP SVVELAANSD
201: ILVVACPLNE QTRHIVNREV IEVLGPKGVL INIGRGPHVD EPELVSALVE GRLGGAGLDV FEDEPNVPEA LFALDNVVLV PHVGSGTHET RQAMADLVLG
301: NLEAHVLKKP LLTPVV
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Arabidopsis Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.