Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87280 | Canola | cytosol | 87.22 | 88.06 |
| CDY58781 | Canola | cytosol | 87.86 | 87.86 |
| Bra035206.1-P | Field mustard | cytosol | 86.9 | 87.74 |
| CDX79406 | Canola | cytosol | 87.54 | 87.54 |
| CDX67931 | Canola | cytosol | 86.9 | 86.9 |
| Bra003537.1-P | Field mustard | cytosol | 86.9 | 86.9 |
| Solyc03g120670.2.1 | Tomato | cytosol, nucleus, plastid | 78.59 | 78.59 |
| VIT_09s0002g04300.t01 | Wine grape | cytosol | 74.76 | 74.76 |
| KRH47286 | Soybean | nucleus | 73.8 | 73.8 |
| Solyc12g044260.1.1 | Tomato | cytosol | 73.8 | 73.8 |
| PGSC0003DMT400019584 | Potato | cytosol | 73.16 | 73.16 |
| Solyc12g044250.1.1 | Tomato | vacuole | 72.84 | 72.38 |
| KRH44352 | Soybean | peroxisome | 34.5 | 70.59 |
| PGSC0003DMT400019586 | Potato | extracellular | 70.61 | 70.16 |
| GSMUA_Achr3P03420_001 | Banana | cytosol | 70.61 | 69.94 |
| TraesCS3A01G153500.1 | Wheat | peroxisome | 69.97 | 68.87 |
| TraesCS3B01G180100.1 | Wheat | cytosol, golgi, unclear | 69.33 | 68.67 |
| TraesCS3D01G160800.1 | Wheat | cytosol | 69.65 | 68.55 |
| KXG31500 | Sorghum | cytosol | 66.77 | 66.35 |
| TraesCS4B01G324200.1 | Wheat | peroxisome | 66.77 | 66.14 |
| VIT_09s0002g04290.t01 | Wine grape | cytosol, plastid | 65.81 | 65.81 |
| Os01t0228600-01 | Rice | extracellular | 65.81 | 65.19 |
| TraesCS5A01G496700.1 | Wheat | cytosol, peroxisome, plastid | 65.18 | 64.56 |
| Solyc03g120680.2.1 | Tomato | nucleus | 62.62 | 63.02 |
| KRH09880 | Soybean | cytosol | 60.38 | 62.38 |
| GSMUA_Achr3P31530_001 | Banana | cytosol | 61.02 | 60.44 |
| Zm00001d030544_P001 | Maize | cytosol, extracellular | 60.7 | 59.38 |
| AT1G12550.1 | Thale cress | cytosol | 46.65 | 45.2 |
| HORVU3Hr1G031200.3 | Barley | cytosol, mitochondrion | 69.65 | 44.86 |
| AT2G45630.2 | Thale cress | plastid | 41.85 | 38.76 |
| AT1G68010.2 | Thale cress | cytosol | 27.48 | 22.22 |
| AT1G72190.1 | Thale cress | mitochondrion | 24.28 | 20.38 |
| AT5G14780.1 | Thale cress | mitochondrion | 22.36 | 18.23 |
| AT3G19480.1 | Thale cress | plastid | 24.28 | 12.93 |
| AT4G34200.1 | Thale cress | plastid | 24.28 | 12.6 |
| AT1G17745.2 | Thale cress | plastid | 25.56 | 12.29 |
| TraesCS3D01G160900.1 | Wheat | cytosol | 7.03 | 11.83 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | EntrezGene:844326 | UniProt:A0A178W4H7 | ProteinID:AAG52259.1 | ProteinID:AEE36315.1 |
| ProteinID:AEE36316.1 | ArrayExpress:AT1G79870 | EnsemblPlantsGene:AT1G79870 | RefSeq:AT1G79870 | TAIR:AT1G79870 | RefSeq:AT1G79870-TAIR-G |
| EnsemblPlants:AT1G79870.1 | TAIR:AT1G79870.1 | EMBL:AY069901 | EMBL:AY088166 | EMBL:AY113022 | Unigene:At.27554 |
| InterPro:D-isomer_2_OHA_DH_cat_dom | InterPro:D-isomer_DH_CS1 | InterPro:D-isomer_DH_NAD-bd | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009853 | GO:GO:0009854 | GO:GO:0009987 | GO:GO:0016491 |
| GO:GO:0016616 | GO:GO:0016618 | GO:GO:0030267 | GO:GO:0051287 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_001185444.1 | RefSeq:NP_178105.1 | ProteinID:OAP12263.1 | PFAM:PF00389 | PFAM:PF02826 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00065 |
| PANTHER:PTHR10996 | PANTHER:PTHR10996:SF180 | UniProt:Q9CA90 | SUPFAM:SSF51735 | SUPFAM:SSF52283 | UniParc:UPI000009DDB1 |
| SEG:seg | : | : | : | : | : |
Description
HPR2Glyoxylate/hydroxypyruvate reductase A HPR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA90]
Coordinates
chr1:+:30044746..30046148
Molecular Weight (calculated)
34163.4 Da
IEP (calculated)
5.697
GRAVY (calculated)
0.048
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MESIGVLMMC PMSSYLENEL EKRFNLLRFW TSPEKSVLLE THRNSIRAVV GNASAGADAQ LISDLPNLEI VSSFSVGLDK IDLGKCKEKG IRVTNTPDVL
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
101: TEDVADLAIG LILALLRRLC ECDRYVRSGK WKQGEFQLTT KFSGKSVGII GLGRIGTAIA KRAEAFSCPI NYYSRTIKPD VAYKYYPTVV DLAQNSDILV
201: VACPLTEQTR HIVDRQVMDA LGAKGVLINI GRGPHVDEQE LIKALTEGRL GGAALDVFEQ EPHVPEELFG LENVVLLPHV GSGTVETRNA MADLVVGNLE
301: AHFSGKSLLT PVV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.